Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.1■□□□□ 0.33
CTNND1O60716 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.1■□□□□ 0.33
CTNND1O60716 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.1■□□□□ 0.33
CTNND1O60716 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.1■□□□□ 0.33
CTNND1O60716 AC124068.2-201ENST00000569473 1109 ntBASIC17.1■□□□□ 0.33
CTNND1O60716 RPL17P45-201ENST00000586289 509 ntBASIC17.1■□□□□ 0.33
CTNND1O60716 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.1■□□□□ 0.33
CTNND1O60716 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.1■□□□□ 0.33
CTNND1O60716 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CTNND1O60716 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.1■□□□□ 0.33
CTNND1O60716 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.1■□□□□ 0.33
CTNND1O60716 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.1■□□□□ 0.33
CTNND1O60716 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.1■□□□□ 0.33
CTNND1O60716 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.09■□□□□ 0.33
CTNND1O60716 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CTNND1O60716 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CTNND1O60716 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.09■□□□□ 0.33
CTNND1O60716 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.09■□□□□ 0.33
CTNND1O60716 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.09■□□□□ 0.33
CTNND1O60716 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.09■□□□□ 0.33
CTNND1O60716 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CTNND1O60716 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.09■□□□□ 0.33
CTNND1O60716 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CTNND1O60716 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CTNND1O60716 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.09■□□□□ 0.33
CTNND1O60716 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.09■□□□□ 0.33
CTNND1O60716 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CTNND1O60716 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CTNND1O60716 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CTNND1O60716 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CTNND1O60716 AC087392.5-201ENST00000612517 489 ntBASIC17.09■□□□□ 0.33
CTNND1O60716 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.09■□□□□ 0.33
CTNND1O60716 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.09■□□□□ 0.33
CTNND1O60716 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CTNND1O60716 AC099063.4-201ENST00000641099 1602 ntBASIC17.09■□□□□ 0.33
CTNND1O60716 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CTNND1O60716 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.09■□□□□ 0.33
CTNND1O60716 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.09■□□□□ 0.33
CTNND1O60716 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.09■□□□□ 0.33
CTNND1O60716 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.09■□□□□ 0.33
CTNND1O60716 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CTNND1O60716 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNND1O60716 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CTNND1O60716 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNND1O60716 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNND1O60716 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.08■□□□□ 0.33
CTNND1O60716 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CTNND1O60716 AC073347.1-201ENST00000421633 2643 ntBASIC17.08■□□□□ 0.33
CTNND1O60716 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNND1O60716 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNND1O60716 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.08■□□□□ 0.33
CTNND1O60716 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.08■□□□□ 0.33
CTNND1O60716 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNND1O60716 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNND1O60716 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CTNND1O60716 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CTNND1O60716 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNND1O60716 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.08■□□□□ 0.32
CTNND1O60716 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.08■□□□□ 0.32
CTNND1O60716 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 RN7SL818P-201ENST00000485099 259 ntBASIC17.08■□□□□ 0.32
CTNND1O60716 RN7SL81P-201ENST00000493781 261 ntBASIC17.08■□□□□ 0.32
CTNND1O60716 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.08■□□□□ 0.32
CTNND1O60716 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.08■□□□□ 0.32
CTNND1O60716 RN7SL725P-201ENST00000606439 259 ntBASIC17.08■□□□□ 0.32
CTNND1O60716 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms