Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ZIC3O60481 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.2□□□□□ -0.3
ZIC3O60481 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ZIC3O60481 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ZIC3O60481 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.2□□□□□ -0.3
ZIC3O60481 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.2□□□□□ -0.3
ZIC3O60481 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.2□□□□□ -0.3
ZIC3O60481 EIF4HP1-201ENST00000453115 687 ntBASIC13.2□□□□□ -0.3
ZIC3O60481 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.2□□□□□ -0.3
ZIC3O60481 AC022494.1-201ENST00000466044 728 ntBASIC13.2□□□□□ -0.3
ZIC3O60481 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 SCARNA20.5-201ENST00000516991 142 ntBASIC13.2□□□□□ -0.3
ZIC3O60481 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.2□□□□□ -0.3
ZIC3O60481 AC022217.1-201ENST00000521069 738 ntBASIC13.2□□□□□ -0.3
ZIC3O60481 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 AC009779.1-201ENST00000551138 283 ntBASIC13.2□□□□□ -0.3
ZIC3O60481 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.2□□□□□ -0.3
ZIC3O60481 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 AC138649.2-201ENST00000615886 705 ntBASIC13.2□□□□□ -0.3
ZIC3O60481 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
ZIC3O60481 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ZIC3O60481 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ZIC3O60481 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ZIC3O60481 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
ZIC3O60481 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.2□□□□□ -0.3
ZIC3O60481 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.2□□□□□ -0.3
ZIC3O60481 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
ZIC3O60481 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ZIC3O60481 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.2□□□□□ -0.3
ZIC3O60481 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ZIC3O60481 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.2□□□□□ -0.3
ZIC3O60481 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
ZIC3O60481 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC3O60481 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
ZIC3O60481 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ZIC3O60481 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ZIC3O60481 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ZIC3O60481 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ZIC3O60481 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
ZIC3O60481 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
ZIC3O60481 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.19□□□□□ -0.3
ZIC3O60481 ST13P19-201ENST00000442505 1124 ntBASIC13.19□□□□□ -0.3
ZIC3O60481 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.19□□□□□ -0.3
ZIC3O60481 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.19□□□□□ -0.3
ZIC3O60481 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.19□□□□□ -0.3
ZIC3O60481 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.19□□□□□ -0.3
ZIC3O60481 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.19□□□□□ -0.3
ZIC3O60481 AC003686.1-201ENST00000550956 1034 ntBASIC13.19□□□□□ -0.3
ZIC3O60481 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.19□□□□□ -0.3
ZIC3O60481 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.19□□□□□ -0.3
ZIC3O60481 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.19□□□□□ -0.3
ZIC3O60481 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.19□□□□□ -0.3
ZIC3O60481 AL645939.5-201ENST00000606834 243 ntBASIC13.19□□□□□ -0.3
ZIC3O60481 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.19□□□□□ -0.3
ZIC3O60481 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ZIC3O60481 AC133540.1-201ENST00000620845 1019 ntBASIC13.19□□□□□ -0.3
ZIC3O60481 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
ZIC3O60481 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.19□□□□□ -0.3
ZIC3O60481 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.19□□□□□ -0.3
ZIC3O60481 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.19□□□□□ -0.3
ZIC3O60481 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.19□□□□□ -0.3
ZIC3O60481 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ZIC3O60481 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ZIC3O60481 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.19□□□□□ -0.3
ZIC3O60481 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZIC3O60481 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.19□□□□□ -0.3
ZIC3O60481 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ZIC3O60481 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
ZIC3O60481 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms