Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.47□□□□□ -0.57
PDE6DO43924 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.47□□□□□ -0.57
PDE6DO43924 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
PDE6DO43924 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
PDE6DO43924 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
PDE6DO43924 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
PDE6DO43924 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.46□□□□□ -0.57
PDE6DO43924 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
PDE6DO43924 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
PDE6DO43924 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.46□□□□□ -0.57
PDE6DO43924 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
PDE6DO43924 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.46□□□□□ -0.57
PDE6DO43924 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.46□□□□□ -0.57
PDE6DO43924 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
PDE6DO43924 TUBB8P4-201ENST00000511806 1324 ntBASIC11.46□□□□□ -0.57
PDE6DO43924 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
PDE6DO43924 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.46□□□□□ -0.57
PDE6DO43924 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.46□□□□□ -0.57
PDE6DO43924 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
PDE6DO43924 AL391647.1-201ENST00000395664 511 ntBASIC11.46□□□□□ -0.57
PDE6DO43924 AL355306.1-201ENST00000415580 579 ntBASIC11.46□□□□□ -0.57
PDE6DO43924 AC074338.1-201ENST00000416825 156 ntBASIC11.46□□□□□ -0.57
PDE6DO43924 AC136604.1-202ENST00000425471 771 ntBASIC11.46□□□□□ -0.57
PDE6DO43924 AL671277.1-201ENST00000429656 993 ntBASIC11.46□□□□□ -0.57
PDE6DO43924 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.46□□□□□ -0.57
PDE6DO43924 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.46□□□□□ -0.57
PDE6DO43924 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.46□□□□□ -0.57
PDE6DO43924 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.46□□□□□ -0.57
PDE6DO43924 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.46□□□□□ -0.57
PDE6DO43924 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.46□□□□□ -0.57
PDE6DO43924 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.46□□□□□ -0.57
PDE6DO43924 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.46□□□□□ -0.57
PDE6DO43924 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.46□□□□□ -0.57
PDE6DO43924 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.46□□□□□ -0.57
PDE6DO43924 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
PDE6DO43924 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.46□□□□□ -0.57
PDE6DO43924 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
PDE6DO43924 AC011498.7-201ENST00000624986 2027 ntBASIC11.46□□□□□ -0.57
PDE6DO43924 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
PDE6DO43924 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
PDE6DO43924 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PDE6DO43924 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
PDE6DO43924 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
PDE6DO43924 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
PDE6DO43924 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.46□□□□□ -0.58
PDE6DO43924 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
PDE6DO43924 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
PDE6DO43924 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC11.46□□□□□ -0.58
PDE6DO43924 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
PDE6DO43924 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.46□□□□□ -0.58
PDE6DO43924 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
PDE6DO43924 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
PDE6DO43924 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.45□□□□□ -0.58
PDE6DO43924 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.45□□□□□ -0.58
PDE6DO43924 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.45□□□□□ -0.58
PDE6DO43924 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
PDE6DO43924 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
PDE6DO43924 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms