Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.28■□□□□ 0.04
MSI1O43347 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 KHSRPP1-201ENST00000427983 1768 ntBASIC15.28■□□□□ 0.04
MSI1O43347 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.28■□□□□ 0.04
MSI1O43347 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MSI1O43347 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSI1O43347 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MSI1O43347 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MSI1O43347 AL390755.1-201ENST00000623716 2027 ntBASIC15.27■□□□□ 0.04
MSI1O43347 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MSI1O43347 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
MSI1O43347 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.27■□□□□ 0.04
MSI1O43347 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.27■□□□□ 0.04
MSI1O43347 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MSI1O43347 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MSI1O43347 AC113367.3-201ENST00000508316 1912 ntBASIC15.27■□□□□ 0.04
MSI1O43347 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MSI1O43347 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MSI1O43347 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MSI1O43347 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
MSI1O43347 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MSI1O43347 AC136759.1-202ENST00000530858 2194 ntBASIC15.27■□□□□ 0.04
MSI1O43347 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.27■□□□□ 0.04
MSI1O43347 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
MSI1O43347 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MSI1O43347 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MSI1O43347 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MSI1O43347 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.27■□□□□ 0.04
MSI1O43347 AL157407.1-201ENST00000435784 904 ntBASIC15.27■□□□□ 0.04
MSI1O43347 AC104073.2-201ENST00000453737 312 ntBASIC15.27■□□□□ 0.04
MSI1O43347 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MSI1O43347 TUBB8P8-201ENST00000458717 1058 ntBASIC15.27■□□□□ 0.04
MSI1O43347 AC022447.6-201ENST00000515522 438 ntBASIC15.27■□□□□ 0.04
MSI1O43347 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.27■□□□□ 0.04
MSI1O43347 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.27■□□□□ 0.04
MSI1O43347 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.27■□□□□ 0.04
MSI1O43347 AC008805.1-201ENST00000590892 364 ntBASIC15.27■□□□□ 0.04
MSI1O43347 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
MSI1O43347 AL023803.2-201ENST00000620080 638 ntBASIC15.27■□□□□ 0.04
MSI1O43347 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.27■□□□□ 0.04
MSI1O43347 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
MSI1O43347 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
MSI1O43347 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MSI1O43347 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.27■□□□□ 0.03
MSI1O43347 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.27■□□□□ 0.03
MSI1O43347 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.27■□□□□ 0.03
MSI1O43347 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
MSI1O43347 TMBIM7P-202ENST00000641474 1516 ntBASIC15.27■□□□□ 0.03
MSI1O43347 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
MSI1O43347 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
MSI1O43347 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MSI1O43347 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
MSI1O43347 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.26■□□□□ 0.03
MSI1O43347 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.26■□□□□ 0.03
MSI1O43347 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.26■□□□□ 0.03
MSI1O43347 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.26■□□□□ 0.03
MSI1O43347 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.26■□□□□ 0.03
MSI1O43347 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
MSI1O43347 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.26■□□□□ 0.03
MSI1O43347 KRT8P13-201ENST00000463294 1010 ntBASIC15.26■□□□□ 0.03
MSI1O43347 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.26■□□□□ 0.03
MSI1O43347 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
MSI1O43347 AC005324.6-201ENST00000587972 613 ntBASIC15.26■□□□□ 0.03
MSI1O43347 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.26■□□□□ 0.03
MSI1O43347 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.26■□□□□ 0.03
MSI1O43347 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
MSI1O43347 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 AGGF1P1-201ENST00000509500 2073 ntBASIC15.26■□□□□ 0.03
MSI1O43347 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.26■□□□□ 0.03
MSI1O43347 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MSI1O43347 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MSI1O43347 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MSI1O43347 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
MSI1O43347 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.25■□□□□ 0.03
MSI1O43347 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 224.7 ms