Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
APAF1O14727 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC19.31■□□□□ 0.68
APAF1O14727 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APAF1O14727 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.31■□□□□ 0.68
APAF1O14727 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APAF1O14727 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
APAF1O14727 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
APAF1O14727 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC19.31■□□□□ 0.68
APAF1O14727 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
APAF1O14727 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
APAF1O14727 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
APAF1O14727 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.3■□□□□ 0.68
APAF1O14727 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC19.3■□□□□ 0.68
APAF1O14727 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC19.3■□□□□ 0.68
APAF1O14727 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
APAF1O14727 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 RNMTL1P1-201ENST00000454103 560 ntBASIC19.3■□□□□ 0.68
APAF1O14727 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.3■□□□□ 0.68
APAF1O14727 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.3■□□□□ 0.68
APAF1O14727 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.3■□□□□ 0.68
APAF1O14727 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 AC104982.3-201ENST00000581995 514 ntBASIC19.3■□□□□ 0.68
APAF1O14727 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
APAF1O14727 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.3■□□□□ 0.68
APAF1O14727 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
APAF1O14727 AC063926.3-201ENST00000624734 5658 ntBASIC19.3■□□□□ 0.68
APAF1O14727 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
APAF1O14727 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
APAF1O14727 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC19.29■□□□□ 0.68
APAF1O14727 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC19.29■□□□□ 0.68
APAF1O14727 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
APAF1O14727 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
APAF1O14727 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.29■□□□□ 0.68
APAF1O14727 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
APAF1O14727 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.29■□□□□ 0.68
APAF1O14727 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.29■□□□□ 0.68
APAF1O14727 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.29■□□□□ 0.68
APAF1O14727 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.29■□□□□ 0.68
APAF1O14727 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.29■□□□□ 0.68
APAF1O14727 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.29■□□□□ 0.68
APAF1O14727 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.29■□□□□ 0.68
APAF1O14727 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.29■□□□□ 0.68
APAF1O14727 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC19.29■□□□□ 0.68
APAF1O14727 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.29■□□□□ 0.68
APAF1O14727 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC19.29■□□□□ 0.68
APAF1O14727 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.29■□□□□ 0.68
APAF1O14727 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.29■□□□□ 0.68
APAF1O14727 AC005962.1-201ENST00000584100 773 ntBASIC19.29■□□□□ 0.68
APAF1O14727 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
APAF1O14727 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
APAF1O14727 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 HSPA8P5-201ENST00000456928 2069 ntBASIC19.29■□□□□ 0.68
APAF1O14727 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
APAF1O14727 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APAF1O14727 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
APAF1O14727 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
APAF1O14727 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC19.28■□□□□ 0.68
APAF1O14727 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.28■□□□□ 0.68
APAF1O14727 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.28■□□□□ 0.68
APAF1O14727 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.28■□□□□ 0.68
APAF1O14727 AL160314.3-201ENST00000556041 767 ntBASIC19.28■□□□□ 0.68
APAF1O14727 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.28■□□□□ 0.68
APAF1O14727 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.28■□□□□ 0.68
APAF1O14727 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms