Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
CHD2O14647 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD2O14647 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD2O14647 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD2O14647 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD2O14647 AC232323.1-201ENST00000540724 2099 ntBASIC19.69■□□□□ 0.74
CHD2O14647 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD2O14647 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CHD2O14647 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD2O14647 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD2O14647 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CHD2O14647 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CHD2O14647 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD2O14647 KRT18P33-201ENST00000398525 1043 ntBASIC19.68■□□□□ 0.74
CHD2O14647 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC19.68■□□□□ 0.74
CHD2O14647 ALG1L15P-201ENST00000482834 794 ntBASIC19.68■□□□□ 0.74
CHD2O14647 AC004923.3-201ENST00000527532 355 ntBASIC19.68■□□□□ 0.74
CHD2O14647 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC19.68■□□□□ 0.74
CHD2O14647 AL162727.3-201ENST00000635661 2787 ntBASIC19.68■□□□□ 0.74
CHD2O14647 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CHD2O14647 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC19.68■□□□□ 0.74
CHD2O14647 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD2O14647 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD2O14647 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC19.68■□□□□ 0.74
CHD2O14647 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CHD2O14647 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CHD2O14647 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CHD2O14647 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD2O14647 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD2O14647 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.68■□□□□ 0.74
CHD2O14647 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD2O14647 AC215219.1-201ENST00000400706 1817 ntBASIC19.67■□□□□ 0.74
CHD2O14647 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CHD2O14647 AC092810.2-201ENST00000431570 362 ntBASIC19.67■□□□□ 0.74
CHD2O14647 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC19.67■□□□□ 0.74
CHD2O14647 CD81-209ENST00000492627 886 ntTSL 3 BASIC19.67■□□□□ 0.74
CHD2O14647 AC093700.1-201ENST00000503348 717 ntBASIC19.67■□□□□ 0.74
CHD2O14647 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHD2O14647 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD2O14647 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD2O14647 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC19.67■□□□□ 0.74
CHD2O14647 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD2O14647 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.67■□□□□ 0.74
CHD2O14647 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD2O14647 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD2O14647 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC19.67■□□□□ 0.74
CHD2O14647 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CHD2O14647 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD2O14647 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD2O14647 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD2O14647 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHD2O14647 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD2O14647 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC19.67■□□□□ 0.74
CHD2O14647 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD2O14647 HNRNPA1P56-201ENST00000505767 954 ntBASIC19.67■□□□□ 0.74
CHD2O14647 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC19.67■□□□□ 0.74
CHD2O14647 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD2O14647 MIR6074-201ENST00000612054 107 ntBASIC19.67■□□□□ 0.74
CHD2O14647 USP39-220ENST00000613444 2161 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD2O14647 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHD2O14647 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD2O14647 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CHD2O14647 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.66■□□□□ 0.74
CHD2O14647 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD2O14647 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.66■□□□□ 0.74
CHD2O14647 RPSAP6-201ENST00000417882 882 ntBASIC19.66■□□□□ 0.74
CHD2O14647 RNU1-80P-201ENST00000459500 161 ntBASIC19.66■□□□□ 0.74
CHD2O14647 RN7SL523P-201ENST00000484401 298 ntBASIC19.66■□□□□ 0.74
CHD2O14647 AC092910.2-201ENST00000491262 348 ntBASIC19.66■□□□□ 0.74
CHD2O14647 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD2O14647 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC19.66■□□□□ 0.74
CHD2O14647 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC19.66■□□□□ 0.74
CHD2O14647 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CHD2O14647 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD2O14647 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC19.66■□□□□ 0.74
CHD2O14647 KF455155.1-201ENST00000604493 303 ntBASIC19.66■□□□□ 0.74
CHD2O14647 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC19.66■□□□□ 0.74
CHD2O14647 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD2O14647 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD2O14647 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.66■□□□□ 0.74
CHD2O14647 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD2O14647 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD2O14647 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD2O14647 RPL10-203ENST00000406022 748 ntTSL 3 BASIC19.65■□□□□ 0.74
CHD2O14647 PHBP10-201ENST00000416467 784 ntBASIC19.65■□□□□ 0.74
CHD2O14647 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms