Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NTN3O00634 PPP1R2P4-201ENST00000424051 595 ntBASIC13.71□□□□□ -0.21
NTN3O00634 RPL35P9-201ENST00000446059 350 ntBASIC13.71□□□□□ -0.21
NTN3O00634 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NTN3O00634 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
NTN3O00634 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NTN3O00634 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.71□□□□□ -0.21
NTN3O00634 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.71□□□□□ -0.21
NTN3O00634 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NTN3O00634 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.71□□□□□ -0.21
NTN3O00634 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NTN3O00634 RN7SL357P-201ENST00000581065 298 ntBASIC13.71□□□□□ -0.21
NTN3O00634 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC13.71□□□□□ -0.21
NTN3O00634 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.71□□□□□ -0.21
NTN3O00634 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NTN3O00634 AL591122.2-201ENST00000624125 1853 ntBASIC13.71□□□□□ -0.21
NTN3O00634 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NTN3O00634 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NTN3O00634 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NTN3O00634 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
NTN3O00634 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NTN3O00634 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
NTN3O00634 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
NTN3O00634 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NTN3O00634 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NTN3O00634 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NTN3O00634 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
NTN3O00634 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC13.7□□□□□ -0.22
NTN3O00634 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
NTN3O00634 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NTN3O00634 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.7□□□□□ -0.22
NTN3O00634 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.7□□□□□ -0.22
NTN3O00634 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 SCARNA12-201ENST00000459155 270 ntBASIC13.7□□□□□ -0.22
NTN3O00634 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.7□□□□□ -0.22
NTN3O00634 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.7□□□□□ -0.22
NTN3O00634 C2orf69P1-201ENST00000563532 1093 ntBASIC13.7□□□□□ -0.22
NTN3O00634 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.7□□□□□ -0.22
NTN3O00634 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC13.7□□□□□ -0.22
NTN3O00634 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.7□□□□□ -0.22
NTN3O00634 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
NTN3O00634 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NTN3O00634 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.7□□□□□ -0.22
NTN3O00634 AC018529.2-202ENST00000611482 3087 ntBASIC13.7□□□□□ -0.22
NTN3O00634 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
NTN3O00634 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 AC105917.1-201ENST00000506637 2539 ntBASIC13.7□□□□□ -0.22
NTN3O00634 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.7□□□□□ -0.22
NTN3O00634 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.7□□□□□ -0.22
NTN3O00634 AJ011931.1-201ENST00000618749 2492 ntBASIC13.7□□□□□ -0.22
NTN3O00634 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.7□□□□□ -0.22
NTN3O00634 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NTN3O00634 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NTN3O00634 AC013268.4-201ENST00000637413 2228 ntBASIC13.7□□□□□ -0.22
NTN3O00634 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NTN3O00634 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NTN3O00634 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NTN3O00634 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NTN3O00634 CCT8L1P-201ENST00000465400 1674 ntBASIC13.69□□□□□ -0.22
NTN3O00634 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NTN3O00634 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NTN3O00634 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NTN3O00634 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NTN3O00634 AC215219.1-201ENST00000400706 1817 ntBASIC13.69□□□□□ -0.22
NTN3O00634 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NTN3O00634 AC064801.2-201ENST00000625052 1303 ntBASIC13.69□□□□□ -0.22
NTN3O00634 AC073347.1-201ENST00000421633 2643 ntBASIC13.69□□□□□ -0.22
NTN3O00634 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.69□□□□□ -0.22
NTN3O00634 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC13.69□□□□□ -0.22
NTN3O00634 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NTN3O00634 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NTN3O00634 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NTN3O00634 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NTN3O00634 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NTN3O00634 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NTN3O00634 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
NTN3O00634 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms