Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.69■□□□□ 0.58
CHL1O00533 FGFR3P5-201ENST00000564496 886 ntBASIC18.69■□□□□ 0.58
CHL1O00533 AC093752.3-201ENST00000567343 901 ntBASIC18.69■□□□□ 0.58
CHL1O00533 MIR6769A-201ENST00000617340 73 ntBASIC18.69■□□□□ 0.58
CHL1O00533 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CHL1O00533 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 INTS4P1-203ENST00000641008 3683 ntBASIC18.69■□□□□ 0.58
CHL1O00533 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.69■□□□□ 0.58
CHL1O00533 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHL1O00533 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CHL1O00533 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.69■□□□□ 0.58
CHL1O00533 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.69■□□□□ 0.58
CHL1O00533 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHL1O00533 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHL1O00533 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CHL1O00533 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHL1O00533 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHL1O00533 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHL1O00533 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHL1O00533 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHL1O00533 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC18.68■□□□□ 0.58
CHL1O00533 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHL1O00533 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.68■□□□□ 0.58
CHL1O00533 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHL1O00533 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHL1O00533 ELK2AP-201ENST00000392510 1007 ntBASIC18.68■□□□□ 0.58
CHL1O00533 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.68■□□□□ 0.58
CHL1O00533 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.68■□□□□ 0.58
CHL1O00533 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHL1O00533 RTN3P1-201ENST00000536295 711 ntBASIC18.68■□□□□ 0.58
CHL1O00533 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHL1O00533 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.68■□□□□ 0.58
CHL1O00533 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CHL1O00533 AL133499.1-201ENST00000596207 608 ntBASIC18.68■□□□□ 0.58
CHL1O00533 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.68■□□□□ 0.58
CHL1O00533 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.68■□□□□ 0.58
CHL1O00533 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC18.68■□□□□ 0.58
CHL1O00533 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CHL1O00533 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHL1O00533 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHL1O00533 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CHL1O00533 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHL1O00533 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHL1O00533 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC18.68■□□□□ 0.58
CHL1O00533 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC18.68■□□□□ 0.58
CHL1O00533 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHL1O00533 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHL1O00533 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.68■□□□□ 0.58
CHL1O00533 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.67■□□□□ 0.58
CHL1O00533 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.67■□□□□ 0.58
CHL1O00533 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.67■□□□□ 0.58
CHL1O00533 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHL1O00533 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CHL1O00533 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CHL1O00533 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.67■□□□□ 0.58
CHL1O00533 AC134698.3-201ENST00000523880 214 ntBASIC18.67■□□□□ 0.58
CHL1O00533 AC140658.4-201ENST00000561990 352 ntBASIC18.67■□□□□ 0.58
CHL1O00533 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.67■□□□□ 0.58
CHL1O00533 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.67■□□□□ 0.58
CHL1O00533 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.67■□□□□ 0.58
CHL1O00533 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.67■□□□□ 0.58
CHL1O00533 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.67■□□□□ 0.58
CHL1O00533 AL109837.1-201ENST00000603272 613 ntBASIC18.67■□□□□ 0.58
CHL1O00533 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.67■□□□□ 0.58
CHL1O00533 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.67■□□□□ 0.58
CHL1O00533 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.67■□□□□ 0.58
CHL1O00533 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CHL1O00533 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHL1O00533 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms