Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC28A1O00337 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.22□□□□□ -0.13
SLC28A1O00337 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC28A1O00337 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC28A1O00337 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.22□□□□□ -0.13
SLC28A1O00337 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 SORD2P-201ENST00000558556 1069 ntBASIC14.22□□□□□ -0.13
SLC28A1O00337 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.22□□□□□ -0.13
SLC28A1O00337 LINC02560-201ENST00000596379 459 ntBASIC14.22□□□□□ -0.13
SLC28A1O00337 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC28A1O00337 AC145423.3-201ENST00000615987 467 ntBASIC14.22□□□□□ -0.13
SLC28A1O00337 AC138466.3-201ENST00000619983 221 ntBASIC14.22□□□□□ -0.13
SLC28A1O00337 AL033527.5-201ENST00000641382 801 ntBASIC14.22□□□□□ -0.13
SLC28A1O00337 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC28A1O00337 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SLC28A1O00337 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC28A1O00337 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC28A1O00337 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC28A1O00337 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SLC28A1O00337 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC28A1O00337 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC28A1O00337 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC28A1O00337 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
SLC28A1O00337 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC28A1O00337 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SLC28A1O00337 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SLC28A1O00337 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC28A1O00337 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SLC28A1O00337 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SLC28A1O00337 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC28A1O00337 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC28A1O00337 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
SLC28A1O00337 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC28A1O00337 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
SLC28A1O00337 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SLC28A1O00337 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC28A1O00337 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC28A1O00337 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC28A1O00337 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SLC28A1O00337 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
SLC28A1O00337 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC28A1O00337 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SLC28A1O00337 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 ALG3P1-201ENST00000508806 1114 ntBASIC14.21□□□□□ -0.13
SLC28A1O00337 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC28A1O00337 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.21□□□□□ -0.13
SLC28A1O00337 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.21□□□□□ -0.13
SLC28A1O00337 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC28A1O00337 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC28A1O00337 AC140912.1-201ENST00000577171 1054 ntBASIC14.21□□□□□ -0.13
SLC28A1O00337 RN7SL48P-201ENST00000579283 293 ntBASIC14.21□□□□□ -0.13
SLC28A1O00337 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC28A1O00337 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC28A1O00337 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
SLC28A1O00337 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SLC28A1O00337 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
SLC28A1O00337 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLC28A1O00337 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC28A1O00337 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC28A1O00337 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC28A1O00337 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC28A1O00337 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SLC28A1O00337 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC28A1O00337 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC28A1O00337 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC28A1O00337 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC28A1O00337 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC28A1O00337 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC28A1O00337 BAATP1-201ENST00000412284 1225 ntBASIC14.2□□□□□ -0.14
SLC28A1O00337 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC28A1O00337 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC28A1O00337 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC28A1O00337 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms