Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.46□□□□□ -0.26
NPIPA3F8WFD2 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA3F8WFD2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA3F8WFD2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 KRT8P29-201ENST00000420409 1371 ntBASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 AC011840.2-201ENST00000563063 1520 ntBASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 AC009093.2-202ENST00000620513 2079 ntBASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 RN7SKP175-201ENST00000408472 289 ntBASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 RNMTL1P1-201ENST00000454103 560 ntBASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 AC005740.2-201ENST00000511085 419 ntBASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 AL358472.3-201ENST00000608147 415 ntBASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 AL023803.2-201ENST00000620080 638 ntBASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 AC023090.2-201ENST00000625182 2110 ntBASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA3F8WFD2 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 INTS4P1-203ENST00000641008 3683 ntBASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 AC007686.3-201ENST00000619017 3487 ntBASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms