Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HFM1A2PYH4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC21.36■■□□□ 1.01
HFM1A2PYH4 AL583805.1-201ENST00000391389 531 ntBASIC21.36■■□□□ 1.01
HFM1A2PYH4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC21.36■■□□□ 1.01
HFM1A2PYH4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HFM1A2PYH4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC21.36■■□□□ 1.01
HFM1A2PYH4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC21.36■■□□□ 1.01
HFM1A2PYH4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HFM1A2PYH4 AC067931.2-201ENST00000623655 2003 ntBASIC21.36■■□□□ 1.01
HFM1A2PYH4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HFM1A2PYH4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC21.36■■□□□ 1.01
HFM1A2PYH4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HFM1A2PYH4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
HFM1A2PYH4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HFM1A2PYH4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HFM1A2PYH4 KRT18P9-201ENST00000604826 1300 ntBASIC21.35■■□□□ 1.01
HFM1A2PYH4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HFM1A2PYH4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HFM1A2PYH4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HFM1A2PYH4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 PPP1R2P4-201ENST00000424051 595 ntBASIC21.35■■□□□ 1.01
HFM1A2PYH4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 FTLP1-201ENST00000449155 526 ntBASIC21.35■■□□□ 1.01
HFM1A2PYH4 LDHBP1-201ENST00000455730 1119 ntBASIC21.35■■□□□ 1.01
HFM1A2PYH4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 AC009560.1-201ENST00000620208 434 ntBASIC21.35■■□□□ 1.01
HFM1A2PYH4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HFM1A2PYH4 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HFM1A2PYH4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HFM1A2PYH4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
HFM1A2PYH4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HFM1A2PYH4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC21.35■■□□□ 1.01
HFM1A2PYH4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HFM1A2PYH4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC21.34■■□□□ 1.01
HFM1A2PYH4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC21.34■■□□□ 1.01
HFM1A2PYH4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HFM1A2PYH4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HFM1A2PYH4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HFM1A2PYH4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
HFM1A2PYH4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HFM1A2PYH4 MARK2P16-201ENST00000605714 1723 ntBASIC21.34■■□□□ 1.01
HFM1A2PYH4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
HFM1A2PYH4 AC103592.1-201ENST00000394513 664 ntBASIC21.34■■□□□ 1.01
HFM1A2PYH4 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HFM1A2PYH4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HFM1A2PYH4 AL512310.5-201ENST00000551999 515 ntBASIC21.34■■□□□ 1.01
HFM1A2PYH4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC21.34■■□□□ 1.01
HFM1A2PYH4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC21.34■■□□□ 1.01
HFM1A2PYH4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HFM1A2PYH4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
HFM1A2PYH4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC21.34■■□□□ 1.01
HFM1A2PYH4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC21.34■■□□□ 1.01
HFM1A2PYH4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HFM1A2PYH4 AC016397.2-201ENST00000624848 1985 ntBASIC21.34■■□□□ 1.01
HFM1A2PYH4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HFM1A2PYH4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HFM1A2PYH4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
HFM1A2PYH4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HFM1A2PYH4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
HFM1A2PYH4 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC21.33■■□□□ 1.01
HFM1A2PYH4 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC21.33■■□□□ 1.01
HFM1A2PYH4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
HFM1A2PYH4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC21.33■■□□□ 1.01
HFM1A2PYH4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
HFM1A2PYH4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC21.33■■□□□ 1.01
HFM1A2PYH4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HFM1A2PYH4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HFM1A2PYH4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HFM1A2PYH4 BAX-205ENST00000391871 687 ntTSL 5 BASIC21.33■■□□□ 1.01
HFM1A2PYH4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC21.33■■□□□ 1.01
HFM1A2PYH4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC21.33■■□□□ 1.01
HFM1A2PYH4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC21.33■■□□□ 1.01
HFM1A2PYH4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC21.33■■□□□ 1.01
HFM1A2PYH4 U62317.3-201ENST00000608319 855 ntBASIC21.33■■□□□ 1.01
HFM1A2PYH4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC21.33■■□□□ 1.01
HFM1A2PYH4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC21.33■■□□□ 1.01
HFM1A2PYH4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
HFM1A2PYH4 AC152010.1-201ENST00000415779 2006 ntBASIC21.33■■□□□ 1
HFM1A2PYH4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
HFM1A2PYH4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC21.33■■□□□ 1
HFM1A2PYH4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HFM1A2PYH4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HFM1A2PYH4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
HFM1A2PYH4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms