Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 CD8B2-202ENST00000417670 633 ntBASIC12.2□□□□□ -0.46
A0A1W2PRF3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 MTX1P1-201ENST00000440904 838 ntBASIC12.2□□□□□ -0.46
A0A1W2PRF3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 AC108725.1-201ENST00000495472 409 ntBASIC12.2□□□□□ -0.46
A0A1W2PRF3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 RN7SL713P-201ENST00000582127 302 ntBASIC12.2□□□□□ -0.46
A0A1W2PRF3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.2□□□□□ -0.46
A0A1W2PRF3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
A0A1W2PRF3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 BTBD6P1-201ENST00000412176 1267 ntBASIC12.19□□□□□ -0.46
A0A1W2PRF3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 MESTP3-201ENST00000503460 968 ntBASIC12.19□□□□□ -0.46
A0A1W2PRF3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
A0A1W2PRF3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.19□□□□□ -0.46
A0A1W2PRF3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms