Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 RPL3P5-201ENST00000441645 1232 ntBASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 AC126755.5-201ENST00000622756 267 ntBASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 ESR1-214ENST00000638569 132 ntTSL 5 BASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BIVM-ERCC5R4GMW8 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 AC092384.3-202ENST00000564646 2873 ntBASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 GDNF-207ENST00000515058 764 ntTSL 5 BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 GOLGA2P7-209ENST00000560408 745 ntBASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 AC132825.4-202ENST00000578792 434 ntBASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 AL160191.2-201ENST00000603975 601 ntBASIC23.64■■□□□ 1.38
BIVM-ERCC5R4GMW8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
BIVM-ERCC5R4GMW8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
BIVM-ERCC5R4GMW8 TUBB8P4-201ENST00000511806 1324 ntBASIC23.64■■□□□ 1.37
BIVM-ERCC5R4GMW8 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
BIVM-ERCC5R4GMW8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC23.64■■□□□ 1.37
BIVM-ERCC5R4GMW8 AL022313.4-201ENST00000562756 2046 ntBASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC090136.2-201ENST00000517809 420 ntBASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC023824.1-201ENST00000562945 2975 ntBASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 FKBP4P8-201ENST00000610931 1369 ntBASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 POR-201ENST00000394893 2532 ntTSL 5 BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
BIVM-ERCC5R4GMW8 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 RN7SL128P-201ENST00000467883 305 ntBASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 COQ10BP2-201ENST00000513804 724 ntBASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 AL359219.1-201ENST00000556311 934 ntBASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
BIVM-ERCC5R4GMW8 PES1P2-201ENST00000449745 1735 ntBASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms