Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 GCOM2-201ENST00000509133 1104 ntBASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 BX640514.1-201ENST00000583223 1918 ntBASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 AC023908.3-201ENST00000564211 3047 ntBASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHB1Q9Y5F3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 FKBP4P6-201ENST00000457486 1332 ntBASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 CD8B2-202ENST00000417670 633 ntBASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 CNN2P10-201ENST00000443067 918 ntBASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 AC011840.2-201ENST00000563063 1520 ntBASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHB1Q9Y5F3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms