Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 YBX2P1-201ENST00000394192 760 ntBASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 FO393414.2-201ENST00000405153 598 ntBASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 KRT18P32-201ENST00000424695 1287 ntBASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 AL591424.1-201ENST00000442569 1213 ntBASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 AC022447.6-201ENST00000515522 438 ntBASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 LINC01225-203ENST00000563550 1244 ntBASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 AC027601.4-201ENST00000611259 610 ntBASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 AC011474.4-201ENST00000623523 2076 ntBASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
RPH3ALQ9UNE2 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 FTO-214ENST00000636218 2227 ntTSL 5 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 AC106818.1-201ENST00000623223 3242 ntBASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 MBLAC2-202ENST00000514906 1936 ntBASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 MIR940-201ENST00000401276 94 ntBASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 AL590627.1-203ENST00000421194 1026 ntBASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 KRT18P64-201ENST00000434946 1219 ntBASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 ALG1L8P-201ENST00000533887 760 ntBASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 AC055717.3-201ENST00000622967 595 ntBASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPH3ALQ9UNE2 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms