Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COMMD9Q9P000 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
COMMD9Q9P000 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COMMD9Q9P000 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
COMMD9Q9P000 AC019294.4-201ENST00000561777 2905 ntBASIC12.66□□□□□ -0.38
COMMD9Q9P000 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
COMMD9Q9P000 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
COMMD9Q9P000 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.66□□□□□ -0.38
COMMD9Q9P000 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COMMD9Q9P000 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COMMD9Q9P000 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.66□□□□□ -0.38
COMMD9Q9P000 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
COMMD9Q9P000 AL035456.1-201ENST00000456064 1369 ntBASIC12.66□□□□□ -0.38
COMMD9Q9P000 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
COMMD9Q9P000 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COMMD9Q9P000 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COMMD9Q9P000 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 AC022145.2-201ENST00000598203 171 ntBASIC12.65□□□□□ -0.38
COMMD9Q9P000 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 TCAM1P-207ENST00000485295 1537 ntBASIC12.65□□□□□ -0.38
COMMD9Q9P000 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.65□□□□□ -0.38
COMMD9Q9P000 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD9Q9P000 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
COMMD9Q9P000 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
COMMD9Q9P000 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.65□□□□□ -0.39
COMMD9Q9P000 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD9Q9P000 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.64□□□□□ -0.39
COMMD9Q9P000 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD9Q9P000 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD9Q9P000 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COMMD9Q9P000 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.64□□□□□ -0.39
COMMD9Q9P000 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COMMD9Q9P000 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD9Q9P000 ELL2P1-201ENST00000413990 1906 ntBASIC12.64□□□□□ -0.39
COMMD9Q9P000 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD9Q9P000 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.64□□□□□ -0.39
COMMD9Q9P000 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
COMMD9Q9P000 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.64□□□□□ -0.39
COMMD9Q9P000 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COMMD9Q9P000 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.64□□□□□ -0.39
COMMD9Q9P000 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD9Q9P000 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD9Q9P000 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
COMMD9Q9P000 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD9Q9P000 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms