Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 AC098614.1-201ENST00000368528 745 ntBASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 AC134915.1-201ENST00000426461 574 ntBASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 HLA-K-203ENST00000430151 1046 ntBASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 GAPDHP40-201ENST00000505218 1006 ntBASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 MBLAC2-202ENST00000514906 1936 ntBASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 AP006294.1-201ENST00000415407 339 ntBASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 NUS1P3-201ENST00000423502 862 ntBASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 COX20P2-201ENST00000452636 358 ntBASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 AC025048.6-201ENST00000634326 1161 ntBASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 STRCP1-201ENST00000509801 5328 ntBASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LIN7CQ9NUP9 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms