Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 MARK2P9-201ENST00000430958 1727 ntBASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 GIMAP3P-201ENST00000495150 836 ntBASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 AL603764.1-201ENST00000636452 321 ntBASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMBRD1Q9NUN5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.89■□□□□ 0.3
LMBRD1Q9NUN5 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.89■□□□□ 0.3
LMBRD1Q9NUN5 AL590440.2-201ENST00000641973 1595 ntBASIC16.89■□□□□ 0.3
LMBRD1Q9NUN5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
LMBRD1Q9NUN5 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
LMBRD1Q9NUN5 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 KRT18P13-201ENST00000400056 1290 ntBASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 HLA-J-203ENST00000494367 1087 ntBASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 RARRES2P5-201ENST00000564013 466 ntBASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 AC009407.1-201ENST00000568958 598 ntBASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 AC027612.4-201ENST00000605371 583 ntBASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMBRD1Q9NUN5 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMBRD1Q9NUN5 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LMBRD1Q9NUN5 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LMBRD1Q9NUN5 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
LMBRD1Q9NUN5 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMBRD1Q9NUN5 PCDHB18P-202ENST00000526308 3197 ntBASIC16.88■□□□□ 0.29
LMBRD1Q9NUN5 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMBRD1Q9NUN5 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC16.88■□□□□ 0.29
LMBRD1Q9NUN5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LMBRD1Q9NUN5 NFIC-211ENST00000641145 8399 ntBASIC16.88■□□□□ 0.29
LMBRD1Q9NUN5 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMBRD1Q9NUN5 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.88■□□□□ 0.29
LMBRD1Q9NUN5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms