Protein–RNA interactions for Protein: Q9HCM2

PLXNA4, Plexin-A4, humanhuman

Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA4Q9HCM2 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC15.18■□□□□ 0.02
PLXNA4Q9HCM2 AL135901.1-201ENST00000451812 333 ntBASIC15.18■□□□□ 0.02
PLXNA4Q9HCM2 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.18■□□□□ 0.02
PLXNA4Q9HCM2 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.18■□□□□ 0.02
PLXNA4Q9HCM2 AP003392.6-201ENST00000607709 325 ntBASIC15.18■□□□□ 0.02
PLXNA4Q9HCM2 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.18■□□□□ 0.02
PLXNA4Q9HCM2 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.18■□□□□ 0.02
PLXNA4Q9HCM2 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.18■□□□□ 0.02
PLXNA4Q9HCM2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PLXNA4Q9HCM2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PLXNA4Q9HCM2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PLXNA4Q9HCM2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.18■□□□□ 0.02
PLXNA4Q9HCM2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 RPL3P2-204ENST00000413027 1203 ntBASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 STK24P1-201ENST00000455035 1291 ntBASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 SORD2P-201ENST00000558556 1069 ntBASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 LINC00244-201ENST00000625073 613 ntBASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 DBET-201ENST00000630918 3363 ntBASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 AL672207.1-201ENST00000328462 1570 ntBASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PLXNA4Q9HCM2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 LINC00265-2P-201ENST00000413372 782 ntBASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 RN7SL788P-201ENST00000460504 316 ntBASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 RN7SL23P-201ENST00000484055 275 ntBASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 TREHP1-201ENST00000531328 465 ntBASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 AC226150.1-201ENST00000544259 466 ntBASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 RN7SL596P-201ENST00000582123 288 ntBASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 EIF5AP2-201ENST00000585668 1047 ntBASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 AL354702.1-201ENST00000442006 1960 ntBASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PLXNA4Q9HCM2 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms