Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.27□□□□□ -0.61
VGLL1Q99990 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.27□□□□□ -0.61
VGLL1Q99990 AC009407.1-201ENST00000568958 598 ntBASIC11.27□□□□□ -0.61
VGLL1Q99990 AC036164.1-201ENST00000570544 333 ntBASIC11.27□□□□□ -0.61
VGLL1Q99990 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.27□□□□□ -0.61
VGLL1Q99990 AC015911.4-201ENST00000588022 1070 ntBASIC11.27□□□□□ -0.61
VGLL1Q99990 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.27□□□□□ -0.61
VGLL1Q99990 AL049840.4-201ENST00000602422 811 ntBASIC11.27□□□□□ -0.61
VGLL1Q99990 SRD5A3P1-201ENST00000603021 949 ntBASIC11.27□□□□□ -0.61
VGLL1Q99990 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
VGLL1Q99990 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
VGLL1Q99990 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.27□□□□□ -0.61
VGLL1Q99990 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.27□□□□□ -0.61
VGLL1Q99990 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.27□□□□□ -0.61
VGLL1Q99990 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.27□□□□□ -0.61
VGLL1Q99990 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
VGLL1Q99990 AC092053.3-201ENST00000641308 4975 ntBASIC11.27□□□□□ -0.61
VGLL1Q99990 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
VGLL1Q99990 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
VGLL1Q99990 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 BTBD7P1-201ENST00000447253 1453 ntBASIC11.26□□□□□ -0.61
VGLL1Q99990 FP325330.2-201ENST00000624219 5630 ntBASIC11.26□□□□□ -0.61
VGLL1Q99990 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.26□□□□□ -0.61
VGLL1Q99990 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
VGLL1Q99990 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC11.26□□□□□ -0.61
VGLL1Q99990 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
VGLL1Q99990 TSSK5P-201ENST00000423978 907 ntBASIC11.26□□□□□ -0.61
VGLL1Q99990 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC11.26□□□□□ -0.61
VGLL1Q99990 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.26□□□□□ -0.61
VGLL1Q99990 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.26□□□□□ -0.61
VGLL1Q99990 AC241585.1-201ENST00000433527 519 ntBASIC11.26□□□□□ -0.61
VGLL1Q99990 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.26□□□□□ -0.61
VGLL1Q99990 FAM86GP-201ENST00000448322 971 ntBASIC11.26□□□□□ -0.61
VGLL1Q99990 AC009477.1-201ENST00000452936 217 ntBASIC11.26□□□□□ -0.61
VGLL1Q99990 VDAC1P7-201ENST00000462417 847 ntBASIC11.26□□□□□ -0.61
VGLL1Q99990 IGHV3-42-201ENST00000520410 361 ntBASIC11.26□□□□□ -0.61
VGLL1Q99990 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.26□□□□□ -0.61
VGLL1Q99990 AC135586.1-201ENST00000539323 574 ntBASIC11.26□□□□□ -0.61
VGLL1Q99990 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.26□□□□□ -0.61
VGLL1Q99990 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
VGLL1Q99990 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.26□□□□□ -0.61
VGLL1Q99990 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC11.26□□□□□ -0.61
VGLL1Q99990 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.26□□□□□ -0.61
VGLL1Q99990 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
VGLL1Q99990 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
VGLL1Q99990 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.26□□□□□ -0.61
VGLL1Q99990 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.26□□□□□ -0.61
VGLL1Q99990 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
VGLL1Q99990 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
VGLL1Q99990 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
VGLL1Q99990 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
VGLL1Q99990 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.26□□□□□ -0.61
VGLL1Q99990 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
VGLL1Q99990 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
VGLL1Q99990 AC073869.1-201ENST00000415574 2762 ntBASIC11.26□□□□□ -0.61
VGLL1Q99990 AC131212.3-201ENST00000624087 4219 ntBASIC11.26□□□□□ -0.61
VGLL1Q99990 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
VGLL1Q99990 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.26□□□□□ -0.61
VGLL1Q99990 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.26□□□□□ -0.61
VGLL1Q99990 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.26□□□□□ -0.61
VGLL1Q99990 AC090505.1-201ENST00000430515 1834 ntBASIC11.25□□□□□ -0.61
VGLL1Q99990 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
VGLL1Q99990 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
VGLL1Q99990 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms