Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RAB40CQ96S21 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB40CQ96S21 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB40CQ96S21 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB40CQ96S21 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RAB40CQ96S21 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.02□□□□□ -0.48
RAB40CQ96S21 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 GAPDHP40-201ENST00000505218 1006 ntBASIC12.02□□□□□ -0.49
RAB40CQ96S21 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 AC093520.2-201ENST00000561830 333 ntBASIC12.02□□□□□ -0.49
RAB40CQ96S21 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 AC023511.2-201ENST00000618803 211 ntBASIC12.02□□□□□ -0.49
RAB40CQ96S21 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 AC111170.3-201ENST00000624282 2464 ntBASIC12.02□□□□□ -0.49
RAB40CQ96S21 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
RAB40CQ96S21 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB40CQ96S21 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 AC005562.1-201ENST00000583030 3219 ntBASIC12.01□□□□□ -0.49
RAB40CQ96S21 MIR193BHG-211ENST00000641433 5365 ntBASIC12.01□□□□□ -0.49
RAB40CQ96S21 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 AC020658.7-201ENST00000624274 2442 ntBASIC12.01□□□□□ -0.49
RAB40CQ96S21 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 SPDYE7P-202ENST00000420373 878 ntBASIC12.01□□□□□ -0.49
RAB40CQ96S21 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 AL353779.1-201ENST00000434793 351 ntBASIC12.01□□□□□ -0.49
RAB40CQ96S21 SPDYE14P-201ENST00000442619 822 ntBASIC12.01□□□□□ -0.49
RAB40CQ96S21 AP006288.1-201ENST00000446065 395 ntBASIC12.01□□□□□ -0.49
RAB40CQ96S21 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 SDHAP3-202ENST00000515467 728 ntBASIC12.01□□□□□ -0.49
RAB40CQ96S21 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 MIR4453-201ENST00000584019 89 ntBASIC12.01□□□□□ -0.49
RAB40CQ96S21 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 AL691403.2-201ENST00000618460 490 ntBASIC12.01□□□□□ -0.49
RAB40CQ96S21 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 TUBB3P1-201ENST00000405796 1332 ntBASIC12.01□□□□□ -0.49
RAB40CQ96S21 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms