Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 CICP1-201ENST00000416803 2410 ntBASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 TPM4P1-201ENST00000436100 807 ntBASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 AC007064.4-201ENST00000637740 555 ntBASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 USO1-201ENST00000264904 4135 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3IPQ96QF0 AC107375.1-201ENST00000564464 2231 ntBASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 AL022323.5-201ENST00000624101 2059 ntBASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms