Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 FOXN3-AS2-201ENST00000554071 1262 ntBASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 AL021707.6-201ENST00000609212 491 ntBASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 AC067931.2-201ENST00000623655 2003 ntBASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 CICP23-201ENST00000605013 2741 ntBASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 AC112693.3-201ENST00000624819 1983 ntBASIC15.71■□□□□ 0.1
TRIM43Q96BQ3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.71■□□□□ 0.1
TRIM43Q96BQ3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM43Q96BQ3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM43Q96BQ3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
TRIM43Q96BQ3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TRIM43Q96BQ3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM43Q96BQ3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
TRIM43Q96BQ3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM43Q96BQ3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 PRORSD1P-202ENST00000563365 2154 ntBASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 AC008894.3-201ENST00000624324 3103 ntBASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 KHSRPP1-201ENST00000427983 1768 ntBASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 RN7SL375P-201ENST00000492442 298 ntBASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 RN7SL767P-201ENST00000493013 295 ntBASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 IGHEP1-201ENST00000521393 651 ntBASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 AL160191.2-201ENST00000603975 601 ntBASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 LINC00528-201ENST00000600723 2160 ntBASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRIM43Q96BQ3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 C18orf15-201ENST00000623680 2534 ntBASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms