Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 AC003102.2-201ENST00000589195 1469 ntBASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 AGAP12P-201ENST00000585227 2359 ntBASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 AL138799.1-201ENST00000448213 1675 ntBASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 AL627223.1-201ENST00000416693 442 ntBASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 AC007969.1-201ENST00000433675 447 ntBASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 MKNK2P1-201ENST00000437526 628 ntBASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CKAP2Q8WWK9 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 DRD5P1-201ENST00000456605 1438 ntBASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms