Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
U2AF1L4Q8WU68 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
U2AF1L4Q8WU68 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
U2AF1L4Q8WU68 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.86■□□□□ 0.29
U2AF1L4Q8WU68 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
U2AF1L4Q8WU68 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.86■□□□□ 0.29
U2AF1L4Q8WU68 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.86■□□□□ 0.29
U2AF1L4Q8WU68 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
U2AF1L4Q8WU68 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 AC010141.1-201ENST00000411585 623 ntBASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 AC026320.2-201ENST00000434379 478 ntBASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 MIR3677-201ENST00000578964 60 ntBASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 AP001527.2-201ENST00000614441 631 ntBASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
U2AF1L4Q8WU68 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 MBLAC2-202ENST00000514906 1936 ntBASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 AC012441.2-201ENST00000444843 739 ntBASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 FAM90A7P-201ENST00000382628 1395 ntBASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 FAM90A23P-201ENST00000400136 1395 ntBASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2AF1L4Q8WU68 KRT8P21-201ENST00000430398 1491 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms