Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 AC023157.3-201ENST00000619086 2088 ntBASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 AC025271.4-201ENST00000621477 1726 ntBASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 AP002803.1-201ENST00000528836 498 ntBASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF248Q8NDW4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 RPL13AP19-201ENST00000434320 584 ntBASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 AC012441.2-201ENST00000444843 739 ntBASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 DNM1P30-201ENST00000563586 452 ntBASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 AC013268.4-201ENST00000637413 2228 ntBASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 CYP51A1P3-201ENST00000400072 1428 ntBASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 DBET-201ENST00000630918 3363 ntBASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms