Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CFAP43Q8NDM7 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CFAP43Q8NDM7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC22.36■■□□□ 1.17
CFAP43Q8NDM7 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CFAP43Q8NDM7 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC22.36■■□□□ 1.17
CFAP43Q8NDM7 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CFAP43Q8NDM7 AL451000.1-201ENST00000451300 1186 ntBASIC22.36■■□□□ 1.17
CFAP43Q8NDM7 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CFAP43Q8NDM7 RN7SL582P-201ENST00000491078 279 ntBASIC22.36■■□□□ 1.17
CFAP43Q8NDM7 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CFAP43Q8NDM7 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC22.36■■□□□ 1.17
CFAP43Q8NDM7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC22.36■■□□□ 1.17
CFAP43Q8NDM7 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 TNRC18P2-201ENST00000417666 2714 ntBASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 HTR7P1-202ENST00000624664 4411 ntBASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 AC063952.3-201ENST00000467756 308 ntBASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 RN7SL564P-201ENST00000496309 250 ntBASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 NAA40-205ENST00000539656 577 ntTSL 4 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 APOC1-209ENST00000592885 562 ntTSL 3 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP43Q8NDM7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 AC144831.1-201ENST00000573312 2656 ntBASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 GEMIN8P4-201ENST00000380526 729 ntBASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 AF274858.1-201ENST00000406288 372 ntBASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 AC098934.1-203ENST00000442868 1262 ntBASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 HELLS-212ENST00000630929 400 ntTSL 5 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 AC006372.4-201ENST00000624122 1543 ntBASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP43Q8NDM7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 HLA-DPA2-205ENST00000433582 733 ntBASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 COX5A-205ENST00000568517 582 ntTSL 3 BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 AC004686.1-201ENST00000605113 538 ntBASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 AC067931.2-201ENST00000623655 2003 ntBASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP43Q8NDM7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms