Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 TBC1D27-202ENST00000424239 1573 ntBASIC19.72■□□□□ 0.75
XRN1Q8IZH2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 RHOC-205ENST00000369636 786 ntTSL 2 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 AC103592.1-201ENST00000394513 664 ntBASIC19.71■□□□□ 0.75
XRN1Q8IZH2 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 ACTBP14-201ENST00000411655 1089 ntBASIC19.71■□□□□ 0.75
XRN1Q8IZH2 RNLS-203ENST00000437752 525 ntTSL 2 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 AC092612.1-201ENST00000514501 998 ntBASIC19.71■□□□□ 0.75
XRN1Q8IZH2 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 AC139713.2-207ENST00000641556 1292 ntBASIC19.71■□□□□ 0.75
XRN1Q8IZH2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 AC027612.2-202ENST00000445955 1199 ntBASIC19.71■□□□□ 0.75
XRN1Q8IZH2 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 AC120498.7-201ENST00000562876 330 ntBASIC19.71■□□□□ 0.75
XRN1Q8IZH2 AC079414.2-201ENST00000567157 1104 ntBASIC19.71■□□□□ 0.75
XRN1Q8IZH2 AC005777.1-201ENST00000588332 187 ntBASIC19.71■□□□□ 0.75
XRN1Q8IZH2 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC19.71■□□□□ 0.75
XRN1Q8IZH2 BX322534.1-201ENST00000635574 241 ntBASIC19.71■□□□□ 0.75
XRN1Q8IZH2 AC215524.1-201ENST00000635696 241 ntBASIC19.71■□□□□ 0.75
XRN1Q8IZH2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 AC092115.1-201ENST00000566277 1402 ntBASIC19.7■□□□□ 0.74
XRN1Q8IZH2 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 U3.5-201ENST00000363448 216 ntBASIC19.7■□□□□ 0.74
XRN1Q8IZH2 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRN1Q8IZH2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 AC091951.1-201ENST00000512854 2465 ntBASIC19.69■□□□□ 0.74
XRN1Q8IZH2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 AC025594.1-201ENST00000469533 543 ntBASIC19.69■□□□□ 0.74
XRN1Q8IZH2 AC022447.6-201ENST00000515522 438 ntBASIC19.69■□□□□ 0.74
XRN1Q8IZH2 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 PMEL-214ENST00000550447 901 ntTSL 3 BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms