Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 FUK-202ENST00000378912 3925 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 AC089987.1-201ENST00000551654 2209 ntBASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 ACTG1P3-201ENST00000431775 1114 ntBASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 TERF1P3-201ENST00000505638 1227 ntBASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC83Q8IWF9 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 AC139712.1-201ENST00000378256 1875 ntBASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 PTP4A1P2-201ENST00000546033 454 ntBASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC83Q8IWF9 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC83Q8IWF9 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC83Q8IWF9 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC83Q8IWF9 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC83Q8IWF9 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
CCDC83Q8IWF9 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC83Q8IWF9 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CCDC83Q8IWF9 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC83Q8IWF9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.33■□□□□ 0.37
CCDC83Q8IWF9 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC83Q8IWF9 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC83Q8IWF9 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC83Q8IWF9 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms