Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 ALG3P1-201ENST00000508806 1114 ntBASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 AC010328.2-201ENST00000597698 1111 ntBASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 AL033527.4-201ENST00000641026 673 ntBASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 AC092658.1-201ENST00000505836 891 ntBASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 AL136301.1-201ENST00000615830 422 ntBASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 AC006504.5-208ENST00000588784 2401 ntBASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD3Q7Z3D4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LYSMD3Q7Z3D4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
LYSMD3Q7Z3D4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.83□□□□□ -0.03
LYSMD3Q7Z3D4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.83□□□□□ -0.03
LYSMD3Q7Z3D4 AP001267.2-201ENST00000532619 2086 ntBASIC14.83□□□□□ -0.03
LYSMD3Q7Z3D4 AC097359.2-201ENST00000604992 2389 ntBASIC14.83□□□□□ -0.03
LYSMD3Q7Z3D4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LYSMD3Q7Z3D4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LYSMD3Q7Z3D4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 PUDPP3-201ENST00000445368 636 ntBASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 MTND2P7-201ENST00000521337 640 ntBASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms