Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.19□□□□□ -0.62
MRPL54Q6P161 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL54Q6P161 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL54Q6P161 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL54Q6P161 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.19□□□□□ -0.62
MRPL54Q6P161 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL54Q6P161 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL54Q6P161 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL54Q6P161 PCDHA6-201ENST00000378126 3267 ntBASIC11.19□□□□□ -0.62
MRPL54Q6P161 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 AL157996.1-201ENST00000624684 2299 ntBASIC11.18□□□□□ -0.62
MRPL54Q6P161 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 FAM220BP-201ENST00000377689 816 ntBASIC11.18□□□□□ -0.62
MRPL54Q6P161 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 ATP5G2P1-201ENST00000433580 426 ntBASIC11.18□□□□□ -0.62
MRPL54Q6P161 VN2R19P-201ENST00000442399 1052 ntBASIC11.18□□□□□ -0.62
MRPL54Q6P161 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 AC117500.6-201ENST00000624871 588 ntBASIC11.18□□□□□ -0.62
MRPL54Q6P161 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 AL645937.6-201ENST00000641122 3727 ntBASIC11.18□□□□□ -0.62
MRPL54Q6P161 WARS-203ENST00000358655 2466 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 VENTXP1-201ENST00000569334 2716 ntBASIC11.18□□□□□ -0.62
MRPL54Q6P161 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL54Q6P161 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL54Q6P161 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
MRPL54Q6P161 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL54Q6P161 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
MRPL54Q6P161 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL54Q6P161 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL54Q6P161 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL54Q6P161 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
MRPL54Q6P161 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
MRPL54Q6P161 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
MRPL54Q6P161 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.17□□□□□ -0.62
MRPL54Q6P161 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
MRPL54Q6P161 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC11.17□□□□□ -0.62
MRPL54Q6P161 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL54Q6P161 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.17□□□□□ -0.62
MRPL54Q6P161 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL54Q6P161 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL54Q6P161 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.17□□□□□ -0.62
MRPL54Q6P161 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
MRPL54Q6P161 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
MRPL54Q6P161 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL54Q6P161 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL54Q6P161 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
MRPL54Q6P161 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms