Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 AGGF1P1-201ENST00000509500 2073 ntBASIC11.81□□□□□ -0.52
FAM78BQ5VT40 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
FAM78BQ5VT40 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 REXO1L1P-201ENST00000379010 6598 ntBASIC11.8□□□□□ -0.52
FAM78BQ5VT40 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 DNAJB3-202ENST00000449667 1266 ntBASIC11.8□□□□□ -0.52
FAM78BQ5VT40 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 AP001059.3-201ENST00000619053 235 ntBASIC11.8□□□□□ -0.52
FAM78BQ5VT40 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 AF228730.6-201ENST00000641497 218 ntBASIC11.8□□□□□ -0.52
FAM78BQ5VT40 AC084121.3-201ENST00000641716 218 ntBASIC11.8□□□□□ -0.52
FAM78BQ5VT40 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 AL360270.3-201ENST00000609118 1348 ntBASIC11.8□□□□□ -0.52
FAM78BQ5VT40 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms