Protein–RNA interactions for Protein: Q3ZCM7

TUBB8, Tubulin beta-8 chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB8Q3ZCM7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 TSPY16P-201ENST00000449843 468 ntBASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBB8Q3ZCM7 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 COX20P2-201ENST00000452636 358 ntBASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 TERF1P3-201ENST00000505638 1227 ntBASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 AC026979.3-201ENST00000607315 403 ntBASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 SPDYE12P-201ENST00000618416 771 ntBASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 AC019294.4-201ENST00000561777 2905 ntBASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 RHPN1-AS1-201ENST00000518049 1918 ntBASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TUBB8Q3ZCM7 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 AC024075.2-201ENST00000598112 1473 ntBASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 AC100757.3-201ENST00000622361 1406 ntBASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB8Q3ZCM7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms