Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SPHKAPQ2M3C7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPHKAPQ2M3C7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC20.54■□□□□ 0.88
SPHKAPQ2M3C7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPHKAPQ2M3C7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPHKAPQ2M3C7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPHKAPQ2M3C7 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC20.54■□□□□ 0.88
SPHKAPQ2M3C7 GOLGA8UP-201ENST00000527159 1755 ntBASIC20.54■□□□□ 0.88
SPHKAPQ2M3C7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPHKAPQ2M3C7 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 BAK1P1-201ENST00000317045 636 ntBASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 FES-203ENST00000394302 2133 ntTSL 5 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 MIR1227-201ENST00000408484 88 ntBASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 KRT18P46-201ENST00000435568 1279 ntBASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 NSD1-211ENST00000511258 809 ntTSL 3 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 AL031673.1-201ENST00000611460 466 ntBASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 AC091769.1-201ENST00000619576 568 ntBASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 AC073210.1-201ENST00000414799 232 ntBASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 AC092573.1-201ENST00000433054 884 ntBASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 AC010234.1-201ENST00000494599 870 ntBASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 AC011247.3-201ENST00000603297 438 ntBASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 FO393412.1-201ENST00000619841 382 ntBASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SPHKAPQ2M3C7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 AL139158.3-201ENST00000641212 1562 ntBASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 NHP2-202ENST00000314397 599 ntTSL 2 BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 PPOX-204ENST00000462866 473 ntTSL 5 BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 AC138466.4-201ENST00000623965 852 ntBASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 AL451007.2-201ENST00000632004 563 ntBASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 HYMAI-201ENST00000635591 3347 ntBASIC20.52■□□□□ 0.88
SPHKAPQ2M3C7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.52■□□□□ 0.87
SPHKAPQ2M3C7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
SPHKAPQ2M3C7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 AC068760.1-201ENST00000493579 1953 ntBASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 RPL35P9-201ENST00000446059 350 ntBASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 AC008741.2-201ENST00000612792 3115 ntBASIC20.51■□□□□ 0.87
SPHKAPQ2M3C7 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SPHKAPQ2M3C7 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SPHKAPQ2M3C7 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SPHKAPQ2M3C7 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms