Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC27Q2M243 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCDC27Q2M243 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC27Q2M243 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC27Q2M243 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC19.05■□□□□ 0.64
CCDC27Q2M243 SCARNA21-201ENST00000517026 139 ntBASIC19.05■□□□□ 0.64
CCDC27Q2M243 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC27Q2M243 AC126915.1-201ENST00000522847 1038 ntBASIC19.05■□□□□ 0.64
CCDC27Q2M243 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC27Q2M243 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC27Q2M243 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC27Q2M243 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC27Q2M243 AC091271.1-201ENST00000611877 1162 ntBASIC19.05■□□□□ 0.64
CCDC27Q2M243 AL008638.5-201ENST00000623814 1298 ntBASIC19.05■□□□□ 0.64
CCDC27Q2M243 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC27Q2M243 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC27Q2M243 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC27Q2M243 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC27Q2M243 TCAM1P-207ENST00000485295 1537 ntBASIC19.05■□□□□ 0.64
CCDC27Q2M243 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC27Q2M243 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC27Q2M243 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 OS9-204ENST00000389146 2091 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 XBP1P1-201ENST00000436573 652 ntBASIC19.04■□□□□ 0.64
CCDC27Q2M243 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 AC021723.1-201ENST00000486306 515 ntBASIC19.04■□□□□ 0.64
CCDC27Q2M243 AC108725.1-201ENST00000495472 409 ntBASIC19.04■□□□□ 0.64
CCDC27Q2M243 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 AC136759.1-202ENST00000530858 2194 ntBASIC19.04■□□□□ 0.64
CCDC27Q2M243 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 SNORD3B-2-202ENST00000571722 791 ntBASIC19.04■□□□□ 0.64
CCDC27Q2M243 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 AC004923.1-202ENST00000642106 209 ntBASIC19.04■□□□□ 0.64
CCDC27Q2M243 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC27Q2M243 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC27Q2M243 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC27Q2M243 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCDC27Q2M243 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC27Q2M243 AC004898.1-201ENST00000451057 766 ntBASIC19.03■□□□□ 0.64
CCDC27Q2M243 SERPINA13P-202ENST00000478994 924 ntBASIC19.03■□□□□ 0.64
CCDC27Q2M243 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC27Q2M243 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC27Q2M243 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC19.03■□□□□ 0.64
CCDC27Q2M243 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC27Q2M243 AC124068.2-201ENST00000569473 1109 ntBASIC19.03■□□□□ 0.64
CCDC27Q2M243 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC27Q2M243 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC27Q2M243 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC27Q2M243 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.03■□□□□ 0.64
CCDC27Q2M243 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC27Q2M243 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms