Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
PCDH1Q08174 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDH1Q08174 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PCDH1Q08174 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PCDH1Q08174 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDH1Q08174 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PCDH1Q08174 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.25□□□□□ -0.13
PCDH1Q08174 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PCDH1Q08174 AC020910.6-201ENST00000623084 1459 ntBASIC14.25□□□□□ -0.13
PCDH1Q08174 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDH1Q08174 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDH1Q08174 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCDH1Q08174 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCDH1Q08174 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PCDH1Q08174 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCDH1Q08174 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCDH1Q08174 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDH1Q08174 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
PCDH1Q08174 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PCDH1Q08174 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDH1Q08174 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PCDH1Q08174 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
PCDH1Q08174 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCDH1Q08174 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PCDH1Q08174 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 TMEM14DP-201ENST00000422205 345 ntBASIC14.24□□□□□ -0.13
PCDH1Q08174 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDH1Q08174 FAM197Y7-201ENST00000432892 766 ntBASIC14.24□□□□□ -0.13
PCDH1Q08174 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDH1Q08174 SORD2P-201ENST00000558556 1069 ntBASIC14.24□□□□□ -0.13
PCDH1Q08174 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDH1Q08174 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.24□□□□□ -0.13
PCDH1Q08174 RN7SL713P-201ENST00000582127 302 ntBASIC14.24□□□□□ -0.13
PCDH1Q08174 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDH1Q08174 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDH1Q08174 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDH1Q08174 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDH1Q08174 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDH1Q08174 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PCDH1Q08174 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDH1Q08174 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDH1Q08174 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDH1Q08174 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PCDH1Q08174 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PCDH1Q08174 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
PCDH1Q08174 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDH1Q08174 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.23□□□□□ -0.13
PCDH1Q08174 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PCDH1Q08174 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDH1Q08174 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
PCDH1Q08174 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDH1Q08174 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDH1Q08174 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PCDH1Q08174 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.23□□□□□ -0.13
PCDH1Q08174 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.23□□□□□ -0.13
PCDH1Q08174 AC078819.1-201ENST00000547454 765 ntBASIC14.23□□□□□ -0.13
PCDH1Q08174 AC012085.1-201ENST00000548270 765 ntBASIC14.23□□□□□ -0.13
PCDH1Q08174 RN7SL371P-201ENST00000578099 267 ntBASIC14.23□□□□□ -0.13
PCDH1Q08174 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.23□□□□□ -0.13
PCDH1Q08174 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.23□□□□□ -0.13
PCDH1Q08174 OR10B1P-201ENST00000601666 907 ntBASIC14.23□□□□□ -0.13
PCDH1Q08174 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 AC012645.4-201ENST00000610691 1061 ntBASIC14.23□□□□□ -0.13
PCDH1Q08174 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms