Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC19.04■□□□□ 0.64
COL16A1Q07092 AC132825.4-202ENST00000578792 434 ntBASIC19.04■□□□□ 0.64
COL16A1Q07092 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC19.04■□□□□ 0.64
COL16A1Q07092 SNX20-205ENST00000610485 557 ntTSL 5 BASIC19.04■□□□□ 0.64
COL16A1Q07092 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC19.04■□□□□ 0.64
COL16A1Q07092 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC19.04■□□□□ 0.64
COL16A1Q07092 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC19.04■□□□□ 0.64
COL16A1Q07092 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC19.04■□□□□ 0.64
COL16A1Q07092 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
COL16A1Q07092 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC19.04■□□□□ 0.64
COL16A1Q07092 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC19.03■□□□□ 0.64
COL16A1Q07092 RN7SL363P-201ENST00000482412 273 ntBASIC19.03■□□□□ 0.64
COL16A1Q07092 SRPK2P-201ENST00000523408 1100 ntBASIC19.03■□□□□ 0.64
COL16A1Q07092 AC010202.1-201ENST00000551181 405 ntBASIC19.03■□□□□ 0.64
COL16A1Q07092 NAT9-204ENST00000578822 839 ntTSL 3 BASIC19.03■□□□□ 0.64
COL16A1Q07092 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC19.03■□□□□ 0.64
COL16A1Q07092 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC19.03■□□□□ 0.64
COL16A1Q07092 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.03■□□□□ 0.64
COL16A1Q07092 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC19.03■□□□□ 0.64
COL16A1Q07092 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
COL16A1Q07092 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.03■□□□□ 0.64
COL16A1Q07092 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
COL16A1Q07092 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.03■□□□□ 0.64
COL16A1Q07092 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
COL16A1Q07092 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
COL16A1Q07092 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC19.03■□□□□ 0.64
COL16A1Q07092 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 MIR181D-201ENST00000384853 137 ntBASIC19.03■□□□□ 0.64
COL16A1Q07092 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC19.03■□□□□ 0.64
COL16A1Q07092 CA5BP1-205ENST00000435806 1064 ntBASIC19.03■□□□□ 0.64
COL16A1Q07092 UGT1A12P-201ENST00000447084 853 ntBASIC19.03■□□□□ 0.64
COL16A1Q07092 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC19.03■□□□□ 0.64
COL16A1Q07092 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC19.03■□□□□ 0.64
COL16A1Q07092 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC19.03■□□□□ 0.64
COL16A1Q07092 MIR5091-201ENST00000578707 93 ntBASIC19.03■□□□□ 0.64
COL16A1Q07092 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC19.03■□□□□ 0.64
COL16A1Q07092 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
COL16A1Q07092 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL16A1Q07092 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL16A1Q07092 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.02■□□□□ 0.64
COL16A1Q07092 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC19.02■□□□□ 0.64
COL16A1Q07092 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC19.02■□□□□ 0.64
COL16A1Q07092 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL16A1Q07092 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL16A1Q07092 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.02■□□□□ 0.64
COL16A1Q07092 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC19.02■□□□□ 0.64
COL16A1Q07092 Z98885.3-201ENST00000624882 1757 ntBASIC19.02■□□□□ 0.64
COL16A1Q07092 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL16A1Q07092 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC19.02■□□□□ 0.64
COL16A1Q07092 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC19.02■□□□□ 0.64
COL16A1Q07092 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL16A1Q07092 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC19.02■□□□□ 0.64
COL16A1Q07092 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC19.02■□□□□ 0.64
COL16A1Q07092 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC19.02■□□□□ 0.64
COL16A1Q07092 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL16A1Q07092 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL16A1Q07092 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COL16A1Q07092 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL16A1Q07092 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COL16A1Q07092 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC19.02■□□□□ 0.63
COL16A1Q07092 AC008620.2-201ENST00000510294 1569 ntBASIC19.02■□□□□ 0.63
COL16A1Q07092 AC103702.1-201ENST00000548801 2630 ntBASIC19.02■□□□□ 0.63
COL16A1Q07092 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL16A1Q07092 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC19.02■□□□□ 0.63
COL16A1Q07092 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL16A1Q07092 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL16A1Q07092 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.01■□□□□ 0.63
COL16A1Q07092 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL16A1Q07092 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.01■□□□□ 0.63
COL16A1Q07092 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.01■□□□□ 0.63
COL16A1Q07092 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms