Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 AC134312.5-201ENST00000568031 1313 ntBASIC14.25□□□□□ -0.13
HMGCS1Q01581 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.25□□□□□ -0.13
HMGCS1Q01581 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 POM121L8P-201ENST00000417732 1281 ntBASIC14.25□□□□□ -0.13
HMGCS1Q01581 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 POM121L9P-203ENST00000441984 1285 ntBASIC14.25□□□□□ -0.13
HMGCS1Q01581 COX20P2-201ENST00000452636 358 ntBASIC14.25□□□□□ -0.13
HMGCS1Q01581 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 AC138696.2-201ENST00000607376 223 ntBASIC14.25□□□□□ -0.13
HMGCS1Q01581 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCS1Q01581 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HMGCS1Q01581 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 BAATP1-201ENST00000412284 1225 ntBASIC14.24□□□□□ -0.13
HMGCS1Q01581 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 AC012441.1-201ENST00000446669 685 ntBASIC14.24□□□□□ -0.13
HMGCS1Q01581 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 ENPP7P14-201ENST00000621765 1040 ntBASIC14.24□□□□□ -0.13
HMGCS1Q01581 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.24□□□□□ -0.13
HMGCS1Q01581 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCS1Q01581 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HMGCS1Q01581 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms