Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.32□□□□□ -0.28
CDK5Q00535 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CDK5Q00535 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.32□□□□□ -0.28
CDK5Q00535 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CDK5Q00535 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.32□□□□□ -0.28
CDK5Q00535 DUX4L27-201ENST00000554796 1261 ntBASIC13.32□□□□□ -0.28
CDK5Q00535 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.32□□□□□ -0.28
CDK5Q00535 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.32□□□□□ -0.28
CDK5Q00535 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.32□□□□□ -0.28
CDK5Q00535 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CDK5Q00535 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 CICP20-201ENST00000443330 2801 ntBASIC13.32□□□□□ -0.28
CDK5Q00535 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CDK5Q00535 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.32□□□□□ -0.28
CDK5Q00535 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
CDK5Q00535 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 AL590440.2-201ENST00000641973 1595 ntBASIC13.32□□□□□ -0.28
CDK5Q00535 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDK5Q00535 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.32□□□□□ -0.28
CDK5Q00535 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.32□□□□□ -0.28
CDK5Q00535 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.31□□□□□ -0.28
CDK5Q00535 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CDK5Q00535 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 SPDYE19P-201ENST00000338590 713 ntBASIC13.31□□□□□ -0.28
CDK5Q00535 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.31□□□□□ -0.28
CDK5Q00535 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CDK5Q00535 AC138696.2-201ENST00000607376 223 ntBASIC13.31□□□□□ -0.28
CDK5Q00535 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 AL390754.1-201ENST00000619088 582 ntBASIC13.31□□□□□ -0.28
CDK5Q00535 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
CDK5Q00535 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.31□□□□□ -0.28
CDK5Q00535 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.31□□□□□ -0.28
CDK5Q00535 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CDK5Q00535 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDK5Q00535 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDK5Q00535 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CDK5Q00535 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.3□□□□□ -0.28
CDK5Q00535 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDK5Q00535 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CDK5Q00535 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDK5Q00535 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDK5Q00535 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDK5Q00535 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDK5Q00535 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms