Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC100850.1-201ENST00000506768 649 ntBASIC13.2□□□□□ -0.3
H3F3AP84243 AC022447.6-201ENST00000515522 438 ntBASIC13.2□□□□□ -0.3
H3F3AP84243 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.2□□□□□ -0.3
H3F3AP84243 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
H3F3AP84243 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.2□□□□□ -0.3
H3F3AP84243 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3AP84243 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.2□□□□□ -0.3
H3F3AP84243 EEF1DP1-201ENST00000585891 896 ntBASIC13.2□□□□□ -0.3
H3F3AP84243 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.2□□□□□ -0.3
H3F3AP84243 BNIP3P29-201ENST00000598302 571 ntBASIC13.2□□□□□ -0.3
H3F3AP84243 AL136301.1-201ENST00000615830 422 ntBASIC13.2□□□□□ -0.3
H3F3AP84243 AC011447.5-201ENST00000616168 564 ntBASIC13.2□□□□□ -0.3
H3F3AP84243 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
H3F3AP84243 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
H3F3AP84243 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
H3F3AP84243 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
H3F3AP84243 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.2□□□□□ -0.3
H3F3AP84243 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
H3F3AP84243 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.2□□□□□ -0.3
H3F3AP84243 AC007686.3-201ENST00000619017 3487 ntBASIC13.2□□□□□ -0.3
H3F3AP84243 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
H3F3AP84243 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.2□□□□□ -0.3
H3F3AP84243 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.2□□□□□ -0.3
H3F3AP84243 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3AP84243 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3AP84243 SNX18-202ENST00000343017 3140 ntBASIC13.19□□□□□ -0.3
H3F3AP84243 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
H3F3AP84243 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
H3F3AP84243 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
H3F3AP84243 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.19□□□□□ -0.3
H3F3AP84243 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
H3F3AP84243 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
H3F3AP84243 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 AC097359.2-201ENST00000604992 2389 ntBASIC13.19□□□□□ -0.3
H3F3AP84243 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.19□□□□□ -0.3
H3F3AP84243 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
H3F3AP84243 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.19□□□□□ -0.3
H3F3AP84243 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 CICP12-201ENST00000455801 843 ntBASIC13.19□□□□□ -0.3
H3F3AP84243 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.19□□□□□ -0.3
H3F3AP84243 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
H3F3AP84243 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.19□□□□□ -0.3
H3F3AP84243 AC010328.2-201ENST00000597698 1111 ntBASIC13.19□□□□□ -0.3
H3F3AP84243 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.19□□□□□ -0.3
H3F3AP84243 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.19□□□□□ -0.3
H3F3AP84243 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.19□□□□□ -0.3
H3F3AP84243 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.19□□□□□ -0.3
H3F3AP84243 MIR6074-201ENST00000612054 107 ntBASIC13.19□□□□□ -0.3
H3F3AP84243 AC027601.3-201ENST00000622907 509 ntBASIC13.19□□□□□ -0.3
H3F3AP84243 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
H3F3AP84243 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.19□□□□□ -0.3
H3F3AP84243 AC015688.4-201ENST00000580780 1647 ntBASIC13.19□□□□□ -0.3
H3F3AP84243 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
H3F3AP84243 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
H3F3AP84243 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.19□□□□□ -0.3
H3F3AP84243 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.19□□□□□ -0.3
H3F3AP84243 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
H3F3AP84243 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3AP84243 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.19□□□□□ -0.3
H3F3AP84243 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3AP84243 AC015818.8-201ENST00000587907 1519 ntBASIC13.18□□□□□ -0.3
H3F3AP84243 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
H3F3AP84243 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3AP84243 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3AP84243 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
H3F3AP84243 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3AP84243 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
H3F3AP84243 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3AP84243 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
H3F3AP84243 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.18□□□□□ -0.3
H3F3AP84243 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.18□□□□□ -0.3
H3F3AP84243 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3AP84243 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3AP84243 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3AP84243 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3AP84243 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3AP84243 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3AP84243 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3AP84243 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3AP84243 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms