Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IRX4P78413 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.47■□□□□ 0.07
IRX4P78413 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.47■□□□□ 0.07
IRX4P78413 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
IRX4P78413 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IRX4P78413 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
IRX4P78413 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.47■□□□□ 0.07
IRX4P78413 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IRX4P78413 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IRX4P78413 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.46■□□□□ 0.07
IRX4P78413 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
IRX4P78413 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.46■□□□□ 0.07
IRX4P78413 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
IRX4P78413 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.46■□□□□ 0.07
IRX4P78413 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.46■□□□□ 0.07
IRX4P78413 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.46■□□□□ 0.07
IRX4P78413 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.46■□□□□ 0.07
IRX4P78413 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
IRX4P78413 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.46■□□□□ 0.07
IRX4P78413 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
IRX4P78413 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.46■□□□□ 0.07
IRX4P78413 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
IRX4P78413 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.46■□□□□ 0.07
IRX4P78413 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 AC006001.1-201ENST00000325130 474 ntBASIC15.46■□□□□ 0.07
IRX4P78413 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.46■□□□□ 0.07
IRX4P78413 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.46■□□□□ 0.07
IRX4P78413 AC025279.2-201ENST00000569730 653 ntBASIC15.46■□□□□ 0.07
IRX4P78413 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.46■□□□□ 0.07
IRX4P78413 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.46■□□□□ 0.07
IRX4P78413 MIR4741-201ENST00000579822 90 ntBASIC15.46■□□□□ 0.07
IRX4P78413 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.46■□□□□ 0.07
IRX4P78413 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.46■□□□□ 0.07
IRX4P78413 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.46■□□□□ 0.07
IRX4P78413 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.46■□□□□ 0.07
IRX4P78413 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.46■□□□□ 0.07
IRX4P78413 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
IRX4P78413 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.46■□□□□ 0.07
IRX4P78413 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.46■□□□□ 0.07
IRX4P78413 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.46■□□□□ 0.07
IRX4P78413 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.46■□□□□ 0.07
IRX4P78413 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
IRX4P78413 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
IRX4P78413 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
IRX4P78413 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.06
IRX4P78413 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
IRX4P78413 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
IRX4P78413 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
IRX4P78413 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
IRX4P78413 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
IRX4P78413 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
IRX4P78413 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
IRX4P78413 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.45■□□□□ 0.06
IRX4P78413 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.45■□□□□ 0.06
IRX4P78413 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.45■□□□□ 0.06
IRX4P78413 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
IRX4P78413 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.45■□□□□ 0.06
IRX4P78413 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
IRX4P78413 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.45■□□□□ 0.06
IRX4P78413 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
IRX4P78413 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
IRX4P78413 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.45■□□□□ 0.06
IRX4P78413 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.45■□□□□ 0.06
IRX4P78413 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
IRX4P78413 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
IRX4P78413 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.45■□□□□ 0.06
IRX4P78413 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
IRX4P78413 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
IRX4P78413 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
IRX4P78413 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
IRX4P78413 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
IRX4P78413 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.45■□□□□ 0.06
IRX4P78413 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
IRX4P78413 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.45■□□□□ 0.06
IRX4P78413 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.45■□□□□ 0.06
IRX4P78413 AL591846.1-201ENST00000451736 433 ntBASIC15.45■□□□□ 0.06
IRX4P78413 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.45■□□□□ 0.06
IRX4P78413 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.45■□□□□ 0.06
IRX4P78413 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
IRX4P78413 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
IRX4P78413 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms