Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
CMC4P56277 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CMC4P56277 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CMC4P56277 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 GSN-215ENST00000545652 2428 ntTSL 2 BASIC10.98□□□□□ -0.65
CMC4P56277 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
CMC4P56277 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CMC4P56277 AC139712.1-201ENST00000378256 1875 ntBASIC10.98□□□□□ -0.65
CMC4P56277 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 NIN-202ENST00000324330 4364 ntTSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 RPS3-201ENST00000278572 907 ntTSL 3 BASIC10.98□□□□□ -0.65
CMC4P56277 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CMC4P56277 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC10.98□□□□□ -0.65
CMC4P56277 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC10.98□□□□□ -0.65
CMC4P56277 TISP43-201ENST00000409793 538 ntTSL 4 BASIC10.98□□□□□ -0.65
CMC4P56277 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC10.98□□□□□ -0.65
CMC4P56277 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC10.98□□□□□ -0.65
CMC4P56277 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
CMC4P56277 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CMC4P56277 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC10.98□□□□□ -0.65
CMC4P56277 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC10.98□□□□□ -0.65
CMC4P56277 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 ACR-203ENST00000529621 708 ntTSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC10.98□□□□□ -0.65
CMC4P56277 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 MIR4683-201ENST00000579659 81 ntBASIC10.98□□□□□ -0.65
CMC4P56277 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC10.98□□□□□ -0.65
CMC4P56277 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC10.98□□□□□ -0.65
CMC4P56277 AC091271.1-201ENST00000611877 1162 ntBASIC10.98□□□□□ -0.65
CMC4P56277 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 KRT8P29-201ENST00000420409 1371 ntBASIC10.98□□□□□ -0.65
CMC4P56277 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC10.98□□□□□ -0.65
CMC4P56277 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
CMC4P56277 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC10.98□□□□□ -0.65
CMC4P56277 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CMC4P56277 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 LINC00528-201ENST00000600723 2160 ntBASIC10.97□□□□□ -0.65
CMC4P56277 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC10.97□□□□□ -0.65
CMC4P56277 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC10.97□□□□□ -0.65
CMC4P56277 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC10.97□□□□□ -0.65
CMC4P56277 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
CMC4P56277 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC10.97□□□□□ -0.65
CMC4P56277 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC10.97□□□□□ -0.65
CMC4P56277 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC10.97□□□□□ -0.65
CMC4P56277 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
CMC4P56277 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC10.97□□□□□ -0.65
CMC4P56277 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms