Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL023775.1-201ENST00000454907 1746 ntBASIC15.84■□□□□ 0.13
VCPP55072 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCPP55072 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VCPP55072 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
VCPP55072 TUBBP5-203ENST00000508529 1334 ntBASIC15.84■□□□□ 0.13
VCPP55072 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.84■□□□□ 0.13
VCPP55072 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCPP55072 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
VCPP55072 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.84■□□□□ 0.13
VCPP55072 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VCPP55072 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCPP55072 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCPP55072 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
VCPP55072 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCPP55072 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.84■□□□□ 0.13
VCPP55072 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VCPP55072 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
VCPP55072 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.84■□□□□ 0.13
VCPP55072 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCPP55072 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.83■□□□□ 0.13
VCPP55072 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VCPP55072 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VCPP55072 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
VCPP55072 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VCPP55072 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.83■□□□□ 0.13
VCPP55072 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.83■□□□□ 0.13
VCPP55072 AL158070.2-201ENST00000623713 1621 ntBASIC15.83■□□□□ 0.13
VCPP55072 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
VCPP55072 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VCPP55072 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.83■□□□□ 0.13
VCPP55072 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.83■□□□□ 0.12
VCPP55072 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.83■□□□□ 0.12
VCPP55072 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
VCPP55072 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
VCPP55072 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.83■□□□□ 0.12
VCPP55072 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
VCPP55072 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.83■□□□□ 0.12
VCPP55072 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.83■□□□□ 0.12
VCPP55072 AL596276.2-201ENST00000447525 331 ntBASIC15.83■□□□□ 0.12
VCPP55072 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.83■□□□□ 0.12
VCPP55072 AC024681.1-201ENST00000521917 487 ntBASIC15.83■□□□□ 0.12
VCPP55072 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.83■□□□□ 0.12
VCPP55072 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.83■□□□□ 0.12
VCPP55072 SAMD11P1-201ENST00000571429 661 ntBASIC15.83■□□□□ 0.12
VCPP55072 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
VCPP55072 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.83■□□□□ 0.12
VCPP55072 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 AC018442.1-201ENST00000421439 2061 ntBASIC15.83■□□□□ 0.12
VCPP55072 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.83■□□□□ 0.12
VCPP55072 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.83■□□□□ 0.12
VCPP55072 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.83■□□□□ 0.12
VCPP55072 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.83■□□□□ 0.12
VCPP55072 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
VCPP55072 AL354989.2-201ENST00000435838 1540 ntBASIC15.83■□□□□ 0.12
VCPP55072 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.83■□□□□ 0.12
VCPP55072 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
VCPP55072 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCPP55072 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VCPP55072 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.82■□□□□ 0.12
VCPP55072 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VCPP55072 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.82■□□□□ 0.12
VCPP55072 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 MYO15B-237ENST00000642007 4893 ntBASIC15.82■□□□□ 0.12
VCPP55072 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.82■□□□□ 0.12
VCPP55072 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.82■□□□□ 0.12
VCPP55072 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.82■□□□□ 0.12
VCPP55072 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VCPP55072 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
VCPP55072 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.82■□□□□ 0.12
VCPP55072 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.82■□□□□ 0.12
VCPP55072 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.82■□□□□ 0.12
VCPP55072 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.82■□□□□ 0.12
VCPP55072 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.82■□□□□ 0.12
VCPP55072 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VCPP55072 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms