Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 CHMP4BP1-201ENST00000556017 588 ntBASIC14.19□□□□□ -0.14
EPHA4P54764 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
EPHA4P54764 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
EPHA4P54764 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.19□□□□□ -0.14
EPHA4P54764 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.19□□□□□ -0.14
EPHA4P54764 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.19□□□□□ -0.14
EPHA4P54764 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.19□□□□□ -0.14
EPHA4P54764 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 AC023908.3-201ENST00000564211 3047 ntBASIC14.19□□□□□ -0.14
EPHA4P54764 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 AC026748.1-201ENST00000624349 3251 ntBASIC14.19□□□□□ -0.14
EPHA4P54764 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
EPHA4P54764 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.19□□□□□ -0.14
EPHA4P54764 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
EPHA4P54764 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
EPHA4P54764 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
EPHA4P54764 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.18□□□□□ -0.14
EPHA4P54764 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
EPHA4P54764 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 AC104581.4-201ENST00000623126 3052 ntBASIC14.18□□□□□ -0.14
EPHA4P54764 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.18□□□□□ -0.14
EPHA4P54764 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.18□□□□□ -0.14
EPHA4P54764 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.18□□□□□ -0.14
EPHA4P54764 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 AL353637.1-201ENST00000451571 732 ntBASIC14.18□□□□□ -0.14
EPHA4P54764 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.18□□□□□ -0.14
EPHA4P54764 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.18□□□□□ -0.14
EPHA4P54764 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.18□□□□□ -0.14
EPHA4P54764 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
EPHA4P54764 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.18□□□□□ -0.14
EPHA4P54764 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.18□□□□□ -0.14
EPHA4P54764 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC14.18□□□□□ -0.14
EPHA4P54764 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.18□□□□□ -0.14
EPHA4P54764 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.18□□□□□ -0.14
EPHA4P54764 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.18□□□□□ -0.14
EPHA4P54764 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
EPHA4P54764 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
EPHA4P54764 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.18□□□□□ -0.14
EPHA4P54764 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.18□□□□□ -0.14
EPHA4P54764 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.18□□□□□ -0.14
EPHA4P54764 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
EPHA4P54764 AGAP7P-201ENST00000582299 2062 ntBASIC14.18□□□□□ -0.14
EPHA4P54764 AGAP14-201ENST00000624701 2060 ntBASIC14.18□□□□□ -0.14
EPHA4P54764 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
EPHA4P54764 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA4P54764 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.18□□□□□ -0.14
EPHA4P54764 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.17□□□□□ -0.14
EPHA4P54764 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
EPHA4P54764 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
EPHA4P54764 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
EPHA4P54764 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
EPHA4P54764 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.17□□□□□ -0.14
EPHA4P54764 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
EPHA4P54764 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
EPHA4P54764 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EPHA4P54764 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EPHA4P54764 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.17□□□□□ -0.14
EPHA4P54764 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.17□□□□□ -0.14
EPHA4P54764 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.17□□□□□ -0.14
EPHA4P54764 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.17□□□□□ -0.14
EPHA4P54764 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EPHA4P54764 RNA5SP423-201ENST00000517127 109 ntBASIC14.17□□□□□ -0.14
EPHA4P54764 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.17□□□□□ -0.14
EPHA4P54764 AC105129.2-201ENST00000559536 390 ntBASIC14.17□□□□□ -0.14
EPHA4P54764 AC103988.2-201ENST00000561804 725 ntBASIC14.17□□□□□ -0.14
EPHA4P54764 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.17□□□□□ -0.14
EPHA4P54764 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EPHA4P54764 AC097724.1-201ENST00000609581 426 ntBASIC14.17□□□□□ -0.14
EPHA4P54764 AC015967.2-201ENST00000624092 234 ntBASIC14.17□□□□□ -0.14
EPHA4P54764 AC006435.4-201ENST00000625037 234 ntBASIC14.17□□□□□ -0.14
EPHA4P54764 AL356737.1-201ENST00000634391 234 ntBASIC14.17□□□□□ -0.14
EPHA4P54764 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EPHA4P54764 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.17□□□□□ -0.14
EPHA4P54764 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EPHA4P54764 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms