Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE1AP54750 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE1AP54750 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE1AP54750 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE1AP54750 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PDE1AP54750 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE1AP54750 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE1AP54750 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE1AP54750 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE1AP54750 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE1AP54750 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE1AP54750 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PDE1AP54750 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.93■□□□□ 0.46
PDE1AP54750 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.93■□□□□ 0.46
PDE1AP54750 HLA-V-201ENST00000429037 534 ntBASIC17.93■□□□□ 0.46
PDE1AP54750 AL161932.2-201ENST00000435436 679 ntBASIC17.93■□□□□ 0.46
PDE1AP54750 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PDE1AP54750 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.93■□□□□ 0.46
PDE1AP54750 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.93■□□□□ 0.46
PDE1AP54750 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.93■□□□□ 0.46
PDE1AP54750 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.93■□□□□ 0.46
PDE1AP54750 DUX4L46-201ENST00000566845 751 ntBASIC17.93■□□□□ 0.46
PDE1AP54750 MIR4259-201ENST00000584466 101 ntBASIC17.93■□□□□ 0.46
PDE1AP54750 AC009955.4-201ENST00000597192 544 ntBASIC17.93■□□□□ 0.46
PDE1AP54750 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PDE1AP54750 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 AC064801.2-201ENST00000625052 1303 ntBASIC17.93■□□□□ 0.46
PDE1AP54750 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PDE1AP54750 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PDE1AP54750 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
PDE1AP54750 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE1AP54750 TMBIM7P-202ENST00000641474 1516 ntBASIC17.93■□□□□ 0.46
PDE1AP54750 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
PDE1AP54750 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
PDE1AP54750 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.92■□□□□ 0.46
PDE1AP54750 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.92■□□□□ 0.46
PDE1AP54750 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.92■□□□□ 0.46
PDE1AP54750 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.92■□□□□ 0.46
PDE1AP54750 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PDE1AP54750 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.92■□□□□ 0.46
PDE1AP54750 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.92■□□□□ 0.46
PDE1AP54750 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.92■□□□□ 0.46
PDE1AP54750 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.92■□□□□ 0.46
PDE1AP54750 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.92■□□□□ 0.46
PDE1AP54750 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.92■□□□□ 0.46
PDE1AP54750 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.92■□□□□ 0.46
PDE1AP54750 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PDE1AP54750 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.92■□□□□ 0.46
PDE1AP54750 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
PDE1AP54750 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PDE1AP54750 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 AC005840.4-201ENST00000541242 2494 ntBASIC17.92■□□□□ 0.46
PDE1AP54750 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
PDE1AP54750 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.92■□□□□ 0.46
PDE1AP54750 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PDE1AP54750 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.92■□□□□ 0.46
PDE1AP54750 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE1AP54750 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PDE1AP54750 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE1AP54750 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE1AP54750 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDE1AP54750 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PDE1AP54750 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
PDE1AP54750 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.91■□□□□ 0.46
PDE1AP54750 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms