Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.19■□□□□ 0.02
ATXN3P54252 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ATXN3P54252 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.19■□□□□ 0.02
ATXN3P54252 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 LRRC59-203ENST00000576448 1531 ntBASIC15.19■□□□□ 0.02
ATXN3P54252 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.19■□□□□ 0.02
ATXN3P54252 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
ATXN3P54252 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ATXN3P54252 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ATXN3P54252 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.19■□□□□ 0.02
ATXN3P54252 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.19■□□□□ 0.02
ATXN3P54252 AC245884.6-201ENST00000515672 1067 ntBASIC15.19■□□□□ 0.02
ATXN3P54252 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.19■□□□□ 0.02
ATXN3P54252 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.19■□□□□ 0.02
ATXN3P54252 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.19■□□□□ 0.02
ATXN3P54252 AC138649.2-201ENST00000615886 705 ntBASIC15.19■□□□□ 0.02
ATXN3P54252 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.19■□□□□ 0.02
ATXN3P54252 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
ATXN3P54252 AC138627.1-207ENST00000641560 1006 ntBASIC15.19■□□□□ 0.02
ATXN3P54252 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
ATXN3P54252 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
ATXN3P54252 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.19■□□□□ 0.02
ATXN3P54252 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ATXN3P54252 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ATXN3P54252 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ATXN3P54252 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.19■□□□□ 0.02
ATXN3P54252 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATXN3P54252 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.19■□□□□ 0.02
ATXN3P54252 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ATXN3P54252 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ATXN3P54252 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.18■□□□□ 0.02
ATXN3P54252 AC023024.2-201ENST00000623561 1993 ntBASIC15.18■□□□□ 0.02
ATXN3P54252 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ATXN3P54252 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.18■□□□□ 0.02
ATXN3P54252 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 FXNP2-201ENST00000411625 547 ntBASIC15.18■□□□□ 0.02
ATXN3P54252 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.18■□□□□ 0.02
ATXN3P54252 AC079178.1-201ENST00000420915 656 ntBASIC15.18■□□□□ 0.02
ATXN3P54252 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.18■□□□□ 0.02
ATXN3P54252 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.18■□□□□ 0.02
ATXN3P54252 AC114812.1-204ENST00000449669 728 ntBASIC15.18■□□□□ 0.02
ATXN3P54252 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.18■□□□□ 0.02
ATXN3P54252 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
ATXN3P54252 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.18■□□□□ 0.02
ATXN3P54252 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.18■□□□□ 0.02
ATXN3P54252 RN7SL48P-201ENST00000579283 293 ntBASIC15.18■□□□□ 0.02
ATXN3P54252 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.18■□□□□ 0.02
ATXN3P54252 AL451050.2-201ENST00000606967 682 ntBASIC15.18■□□□□ 0.02
ATXN3P54252 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.18■□□□□ 0.02
ATXN3P54252 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
ATXN3P54252 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.18■□□□□ 0.02
ATXN3P54252 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
ATXN3P54252 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
ATXN3P54252 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.18■□□□□ 0.02
ATXN3P54252 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.18■□□□□ 0.02
ATXN3P54252 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.18■□□□□ 0.02
ATXN3P54252 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATXN3P54252 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms