Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC073592.2-201ENST00000623062 780 ntBASIC17.85■□□□□ 0.45
NUP98P52948 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.85■□□□□ 0.45
NUP98P52948 PDXDC2P-206ENST00000534700 1315 ntBASIC17.85■□□□□ 0.45
NUP98P52948 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.85■□□□□ 0.45
NUP98P52948 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC17.85■□□□□ 0.45
NUP98P52948 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC17.85■□□□□ 0.45
NUP98P52948 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
NUP98P52948 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NUP98P52948 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NUP98P52948 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NUP98P52948 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
NUP98P52948 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP98P52948 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP98P52948 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP98P52948 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.84■□□□□ 0.45
NUP98P52948 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.84■□□□□ 0.45
NUP98P52948 AC013553.1-201ENST00000560906 267 ntBASIC17.84■□□□□ 0.45
NUP98P52948 USB1-205ENST00000561743 1135 ntTSL 3 BASIC17.84■□□□□ 0.45
NUP98P52948 AC145285.5-201ENST00000562217 361 ntBASIC17.84■□□□□ 0.45
NUP98P52948 LINC00244-201ENST00000625073 613 ntBASIC17.84■□□□□ 0.45
NUP98P52948 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP98P52948 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP98P52948 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NUP98P52948 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NUP98P52948 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NUP98P52948 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.84■□□□□ 0.45
NUP98P52948 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
NUP98P52948 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP98P52948 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NUP98P52948 USP17L6P-201ENST00000382470 1197 ntBASIC17.84■□□□□ 0.45
NUP98P52948 AC103592.1-201ENST00000394513 664 ntBASIC17.84■□□□□ 0.45
NUP98P52948 MIR1227-201ENST00000408484 88 ntBASIC17.84■□□□□ 0.45
NUP98P52948 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.84■□□□□ 0.45
NUP98P52948 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NUP98P52948 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.84■□□□□ 0.45
NUP98P52948 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC17.84■□□□□ 0.45
NUP98P52948 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NUP98P52948 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.84■□□□□ 0.45
NUP98P52948 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
NUP98P52948 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP98P52948 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP98P52948 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP98P52948 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NUP98P52948 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NUP98P52948 KRT8P18-201ENST00000413425 1445 ntBASIC17.83■□□□□ 0.45
NUP98P52948 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NUP98P52948 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.83■□□□□ 0.44
NUP98P52948 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.83■□□□□ 0.44
NUP98P52948 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP98P52948 OR52M2P-201ENST00000414298 959 ntBASIC17.83■□□□□ 0.44
NUP98P52948 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC17.83■□□□□ 0.44
NUP98P52948 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.83■□□□□ 0.44
NUP98P52948 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
NUP98P52948 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC17.83■□□□□ 0.44
NUP98P52948 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC17.83■□□□□ 0.44
NUP98P52948 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC17.83■□□□□ 0.44
NUP98P52948 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
NUP98P52948 AP005264.5-201ENST00000590066 467 ntBASIC17.83■□□□□ 0.44
NUP98P52948 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
NUP98P52948 AC011247.3-201ENST00000603297 438 ntBASIC17.83■□□□□ 0.44
NUP98P52948 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP98P52948 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.83■□□□□ 0.44
NUP98P52948 CTBP2P8-201ENST00000422584 1330 ntBASIC17.83■□□□□ 0.44
NUP98P52948 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP98P52948 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP98P52948 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.83■□□□□ 0.44
NUP98P52948 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP98P52948 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP98P52948 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NUP98P52948 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NUP98P52948 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP98P52948 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP98P52948 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP98P52948 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP98P52948 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP98P52948 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.83■□□□□ 0.44
NUP98P52948 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUP98P52948 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NUP98P52948 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NUP98P52948 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
NUP98P52948 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUP98P52948 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUP98P52948 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.82■□□□□ 0.44
NUP98P52948 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUP98P52948 SAT1-201ENST00000379251 801 ntTSL 2 BASIC17.82■□□□□ 0.44
NUP98P52948 SAT1-202ENST00000379253 909 ntTSL 2 BASIC17.82■□□□□ 0.44
NUP98P52948 SAT1-203ENST00000379254 868 ntTSL 3 BASIC17.82■□□□□ 0.44
NUP98P52948 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUP98P52948 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUP98P52948 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC17.82■□□□□ 0.44
NUP98P52948 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC17.82■□□□□ 0.44
NUP98P52948 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC17.82■□□□□ 0.44
NUP98P52948 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.82■□□□□ 0.44
NUP98P52948 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUP98P52948 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUP98P52948 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUP98P52948 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.82■□□□□ 0.44
NUP98P52948 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUP98P52948 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUP98P52948 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms