Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 FAM86LP-201ENST00000478302 853 ntBASIC13.99□□□□□ -0.17
CLK1P49759 SERBP1P5-201ENST00000510079 1181 ntBASIC13.99□□□□□ -0.17
CLK1P49759 AC104596.2-201ENST00000512793 793 ntBASIC13.99□□□□□ -0.17
CLK1P49759 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.99□□□□□ -0.17
CLK1P49759 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.99□□□□□ -0.17
CLK1P49759 AC023310.3-201ENST00000557027 670 ntBASIC13.99□□□□□ -0.17
CLK1P49759 AC100756.1-201ENST00000562736 682 ntBASIC13.99□□□□□ -0.17
CLK1P49759 AC138749.3-201ENST00000567691 622 ntBASIC13.99□□□□□ -0.17
CLK1P49759 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CLK1P49759 LINC02560-201ENST00000596379 459 ntBASIC13.99□□□□□ -0.17
CLK1P49759 AC004233.3-201ENST00000607794 1269 ntBASIC13.99□□□□□ -0.17
CLK1P49759 AC116165.1-201ENST00000611806 668 ntBASIC13.99□□□□□ -0.17
CLK1P49759 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.99□□□□□ -0.17
CLK1P49759 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 AC008761.3-201ENST00000624803 892 ntBASIC13.99□□□□□ -0.17
CLK1P49759 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.99□□□□□ -0.17
CLK1P49759 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.99□□□□□ -0.17
CLK1P49759 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 AC018529.2-202ENST00000611482 3087 ntBASIC13.99□□□□□ -0.17
CLK1P49759 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
CLK1P49759 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CLK1P49759 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.99□□□□□ -0.17
CLK1P49759 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CLK1P49759 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.99□□□□□ -0.17
CLK1P49759 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CLK1P49759 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.98□□□□□ -0.17
CLK1P49759 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.98□□□□□ -0.17
CLK1P49759 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.98□□□□□ -0.17
CLK1P49759 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLK1P49759 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLK1P49759 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.98□□□□□ -0.17
CLK1P49759 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.98□□□□□ -0.17
CLK1P49759 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.98□□□□□ -0.17
CLK1P49759 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.98□□□□□ -0.17
CLK1P49759 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLK1P49759 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLK1P49759 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.98□□□□□ -0.17
CLK1P49759 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLK1P49759 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.98□□□□□ -0.17
CLK1P49759 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CLK1P49759 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.98□□□□□ -0.17
CLK1P49759 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.98□□□□□ -0.17
CLK1P49759 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CLK1P49759 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
CLK1P49759 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLK1P49759 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.98□□□□□ -0.17
CLK1P49759 AC011700.1-201ENST00000610409 2627 ntBASIC13.98□□□□□ -0.17
CLK1P49759 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CLK1P49759 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.98□□□□□ -0.17
CLK1P49759 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
CLK1P49759 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLK1P49759 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.98□□□□□ -0.17
CLK1P49759 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CLK1P49759 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.97□□□□□ -0.17
CLK1P49759 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms