Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SRP9P49458 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.18□□□□□ -0.3
SRP9P49458 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.18□□□□□ -0.3
SRP9P49458 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SRP9P49458 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.18□□□□□ -0.3
SRP9P49458 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
SRP9P49458 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.18□□□□□ -0.3
SRP9P49458 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.18□□□□□ -0.3
SRP9P49458 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.18□□□□□ -0.3
SRP9P49458 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SRP9P49458 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.18□□□□□ -0.3
SRP9P49458 API5-211ENST00000534695 560 ntTSL 5 BASIC13.18□□□□□ -0.3
SRP9P49458 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.18□□□□□ -0.3
SRP9P49458 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.18□□□□□ -0.3
SRP9P49458 AL049840.4-201ENST00000602422 811 ntBASIC13.18□□□□□ -0.3
SRP9P49458 AC025181.2-201ENST00000606994 802 ntBASIC13.18□□□□□ -0.3
SRP9P49458 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
SRP9P49458 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.18□□□□□ -0.3
SRP9P49458 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SRP9P49458 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SRP9P49458 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.18□□□□□ -0.3
SRP9P49458 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.18□□□□□ -0.3
SRP9P49458 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SRP9P49458 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.18□□□□□ -0.3
SRP9P49458 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.18□□□□□ -0.3
SRP9P49458 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.18□□□□□ -0.3
SRP9P49458 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
SRP9P49458 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SRP9P49458 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.18□□□□□ -0.3
SRP9P49458 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
SRP9P49458 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SRP9P49458 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.17□□□□□ -0.3
SRP9P49458 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SRP9P49458 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SRP9P49458 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SRP9P49458 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.17□□□□□ -0.3
SRP9P49458 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.17□□□□□ -0.3
SRP9P49458 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SRP9P49458 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SRP9P49458 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SRP9P49458 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SRP9P49458 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
SRP9P49458 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SRP9P49458 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 AC134915.1-201ENST00000426461 574 ntBASIC13.17□□□□□ -0.3
SRP9P49458 AL442647.2-201ENST00000429864 857 ntBASIC13.17□□□□□ -0.3
SRP9P49458 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.17□□□□□ -0.3
SRP9P49458 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.17□□□□□ -0.3
SRP9P49458 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.17□□□□□ -0.3
SRP9P49458 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.17□□□□□ -0.3
SRP9P49458 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.17□□□□□ -0.3
SRP9P49458 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.17□□□□□ -0.3
SRP9P49458 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.17□□□□□ -0.3
SRP9P49458 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.17□□□□□ -0.3
SRP9P49458 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
SRP9P49458 TP53TG3HP-202ENST00000569755 579 ntBASIC13.17□□□□□ -0.3
SRP9P49458 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 TMEM261P1-201ENST00000604899 340 ntBASIC13.17□□□□□ -0.3
SRP9P49458 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 AL662799.1-202ENST00000614205 422 ntBASIC13.17□□□□□ -0.3
SRP9P49458 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.17□□□□□ -0.3
SRP9P49458 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.17□□□□□ -0.3
SRP9P49458 AL358472.5-202ENST00000641448 1267 ntBASIC13.17□□□□□ -0.3
SRP9P49458 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.17□□□□□ -0.3
SRP9P49458 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms