Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC16.15■□□□□ 0.18
CENPFP49454 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPFP49454 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC16.15■□□□□ 0.18
CENPFP49454 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.15■□□□□ 0.18
CENPFP49454 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.15■□□□□ 0.18
CENPFP49454 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CENPFP49454 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPFP49454 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CENPFP49454 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPFP49454 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.14■□□□□ 0.17
CENPFP49454 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPFP49454 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPFP49454 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.14■□□□□ 0.17
CENPFP49454 RN7SL128P-201ENST00000467883 305 ntBASIC16.14■□□□□ 0.17
CENPFP49454 AC025594.1-201ENST00000469533 543 ntBASIC16.14■□□□□ 0.17
CENPFP49454 VENTXP3-201ENST00000546480 773 ntBASIC16.14■□□□□ 0.17
CENPFP49454 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CENPFP49454 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPFP49454 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPFP49454 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CENPFP49454 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPFP49454 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC16.14■□□□□ 0.17
CENPFP49454 KRT18P4-201ENST00000422599 1288 ntBASIC16.14■□□□□ 0.17
CENPFP49454 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPFP49454 CDK4P1-201ENST00000454213 828 ntBASIC16.14■□□□□ 0.17
CENPFP49454 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPFP49454 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPFP49454 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPFP49454 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CENPFP49454 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CENPFP49454 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.13■□□□□ 0.17
CENPFP49454 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CENPFP49454 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC16.13■□□□□ 0.17
CENPFP49454 INO80E-209ENST00000567254 625 ntTSL 2 BASIC16.13■□□□□ 0.17
CENPFP49454 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.13■□□□□ 0.17
CENPFP49454 AC144831.1-201ENST00000573312 2656 ntBASIC16.13■□□□□ 0.17
CENPFP49454 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 MROH4P-201ENST00000431302 1578 ntBASIC16.13■□□□□ 0.17
CENPFP49454 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.13■□□□□ 0.17
CENPFP49454 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CENPFP49454 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CENPFP49454 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.13■□□□□ 0.17
CENPFP49454 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CENPFP49454 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CENPFP49454 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 AC022080.1-201ENST00000366255 781 ntBASIC16.13■□□□□ 0.17
CENPFP49454 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC16.13■□□□□ 0.17
CENPFP49454 AL080243.1-201ENST00000423293 1060 ntBASIC16.13■□□□□ 0.17
CENPFP49454 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC16.13■□□□□ 0.17
CENPFP49454 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.13■□□□□ 0.17
CENPFP49454 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.13■□□□□ 0.17
CENPFP49454 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 KLF17P1-201ENST00000547105 1126 ntBASIC16.13■□□□□ 0.17
CENPFP49454 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC16.13■□□□□ 0.17
CENPFP49454 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC16.13■□□□□ 0.17
CENPFP49454 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.13■□□□□ 0.17
CENPFP49454 AC005865.2-202ENST00000635814 725 ntBASIC16.13■□□□□ 0.17
CENPFP49454 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.13■□□□□ 0.17
CENPFP49454 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CENPFP49454 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.13■□□□□ 0.17
CENPFP49454 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC16.13■□□□□ 0.17
CENPFP49454 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.13■□□□□ 0.17
CENPFP49454 AC103702.1-201ENST00000548801 2630 ntBASIC16.13■□□□□ 0.17
CENPFP49454 CASP2-203ENST00000392925 616 ntTSL 3 BASIC16.13■□□□□ 0.17
CENPFP49454 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.13■□□□□ 0.17
CENPFP49454 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC16.13■□□□□ 0.17
CENPFP49454 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CENPFP49454 RN7SL121P-201ENST00000584223 273 ntBASIC16.13■□□□□ 0.17
CENPFP49454 AC254633.1-201ENST00000606790 345 ntBASIC16.13■□□□□ 0.17
CENPFP49454 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.13■□□□□ 0.17
CENPFP49454 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CENPFP49454 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.13■□□□□ 0.17
CENPFP49454 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 TEKT4P2-202ENST00000559466 1312 ntBASIC16.12■□□□□ 0.17
CENPFP49454 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC16.12■□□□□ 0.17
CENPFP49454 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 RN7SL300P-201ENST00000582522 318 ntBASIC16.12■□□□□ 0.17
CENPFP49454 SIGLEC22P-201ENST00000599104 714 ntBASIC16.12■□□□□ 0.17
CENPFP49454 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms